PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

2086
Candidate Protein Records
1740
Pathway-Level Records
4443
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
KN542124.1_FGP001 Rosmarinic Acid C4H low borderline
KN542154.1_FGP001 Rosmarinic Acid C4H low borderline
KN542345.1_FGP001 Rosmarinic Acid C4H low borderline
KN542591.1_FGP001 Rosmarinic Acid C4H medium pass
KN542593.1_FGP001 Rosmarinic Acid C4H medium pass
KN542693.1_FGP001 Rosmarinic Acid C4H medium pass
KN542884.1_FGP002 Rosmarinic Acid C4H low borderline
KN542941.1_FGP001 Rosmarinic Acid C4H low borderline
KN543142.1_FGP001 Rosmarinic Acid C4H low borderline
KN543557.1_FGP001 Rosmarinic Acid C4H medium pass
KN543713.1_FGP001 Rosmarinic Acid C4H medium pass
KN544255.1_FGP001 Rosmarinic Acid C4H medium pass
KN544884.1_FGP001 Rosmarinic Acid C4H medium pass
KN545476.1_FGP001 Rosmarinic Acid C4H medium pass
KN546512.1_FGP001 Rosmarinic Acid C4H low borderline
KN538796.1_FGP003 Rosmarinic Acid CPR medium pass
KN538967.1_FGP017 Rosmarinic Acid CPR medium pass
KN539015.1_FGP012 Rosmarinic Acid CPR low borderline
KN539349.1_FGP004 Rosmarinic Acid CPR low borderline
KN539717.1_FGP005 Rosmarinic Acid CPR medium pass
KN539907.1_FGP007 Rosmarinic Acid CPR medium pass
KN539948.1_FGP001 Rosmarinic Acid CPR medium pass
KN539962.1_FGP001 Rosmarinic Acid CPR medium pass
KN541053.1_FGP002 Rosmarinic Acid CPR medium pass
KN541199.1_FGP001 Rosmarinic Acid CPR medium pass
KN541432.1_FGP002 Rosmarinic Acid CPR low borderline
KN538808.1_FGP008 Rosmarinic Acid HPPR medium pass
KN538808.1_FGP014 Rosmarinic Acid HPPR medium pass
KN538808.1_FGP015 Rosmarinic Acid HPPR low borderline
KN538808.1_FGP042 Rosmarinic Acid HPPR medium pass
KN538989.1_FGP004 Rosmarinic Acid HPPR low borderline
AMDW01016714.1_FGP001 Rosmarinic Acid PAL low borderline
AMDW01023722.1_FGP001 Rosmarinic Acid PAL medium pass
AMDW01066906.1_FGP001 Rosmarinic Acid PAL medium pass
KN538764.1_FGP003 Rosmarinic Acid PAL high pass
KN538764.1_FGP006 Rosmarinic Acid PAL high pass
KN538764.1_FGP009 Rosmarinic Acid PAL high pass
KN538764.1_FGP010 Rosmarinic Acid PAL high pass
KN538921.1_FGP015 Rosmarinic Acid PAL low borderline
KN539221.1_FGP006 Rosmarinic Acid PAL high pass
KN539221.1_FGP010 Rosmarinic Acid PAL high pass
KN539621.1_FGP002 Rosmarinic Acid PAL high pass
AMDW01012950.1_FGP001 Rosmarinic Acid RAS medium pass
AMDW01019591.1_FGP001 Rosmarinic Acid RAS medium pass
AMDW01028766.1_FGP001 Rosmarinic Acid RAS medium pass
AMDW01034761.1_FGP001 Rosmarinic Acid RAS medium pass
KN538722.1_FGP003 Rosmarinic Acid RAS low borderline
KN538740.1_FGP010 Rosmarinic Acid RAS medium pass
KN538760.1_FGP059 Rosmarinic Acid RAS low borderline
KN538770.1_FGP034 Rosmarinic Acid RAS low borderline