PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

2086
Candidate Protein Records
1740
Pathway-Level Records
4443
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
KN539041.1_FGP004 Flavonoid F3H medium pass
KN539051.1_FGP003 Flavonoid F3H medium borderline
KN539085.1_FGP010 Flavonoid F3H medium borderline
KN539106.1_FGP011 Flavonoid F3H medium pass
KN539122.1_FGP012 Flavonoid F3H medium borderline
KN539186.1_FGP001 Flavonoid F3H medium borderline
KN539186.1_FGP004 Flavonoid F3H medium borderline
KN539186.1_FGP006 Flavonoid F3H medium borderline
KN539186.1_FGP008 Flavonoid F3H medium borderline
KN539186.1_FGP013 Flavonoid F3H medium borderline
KN539186.1_FGP014 Flavonoid F3H medium borderline
KN539186.1_FGP017 Flavonoid F3H medium borderline
KN539224.1_FGP014 Flavonoid F3H medium borderline
KN539288.1_FGP009 Flavonoid F3H low borderline
KN539380.1_FGP003 Flavonoid F3H medium borderline
KN539380.1_FGP005 Flavonoid F3H medium borderline
KN539401.1_FGP003 Flavonoid F3H medium borderline
KN539477.1_FGP005 Flavonoid F3H medium borderline
KN539507.1_FGP009 Flavonoid F3H low borderline
KN539561.1_FGP007 Flavonoid F3H low borderline
KN539690.1_FGP002 Flavonoid F3H medium borderline
KN539690.1_FGP006 Flavonoid F3H medium borderline
KN539719.1_FGP005 Flavonoid F3H medium borderline
KN539795.1_FGP001 Flavonoid F3H medium borderline
KN539795.1_FGP003 Flavonoid F3H low borderline
KN539795.1_FGP008 Flavonoid F3H medium pass
KN539958.1_FGP005 Flavonoid F3H medium borderline
KN539968.1_FGP004 Flavonoid F3H low borderline
KN540000.1_FGP001 Flavonoid F3H low borderline
KN540097.1_FGP005 Flavonoid F3H low borderline
KN540124.1_FGP006 Flavonoid F3H medium borderline
KN540345.1_FGP009 Flavonoid F3H medium borderline
KN540414.1_FGP001 Flavonoid F3H medium pass
KN540414.1_FGP003 Flavonoid F3H medium borderline
KN540414.1_FGP006 Flavonoid F3H medium borderline
KN540522.1_FGP004 Flavonoid F3H medium borderline
KN540589.1_FGP002 Flavonoid F3H medium borderline
KN540626.1_FGP001 Flavonoid F3H medium borderline
KN540636.1_FGP001 Flavonoid F3H medium borderline
KN540721.1_FGP003 Flavonoid F3H low borderline
KN540830.1_FGP002 Flavonoid F3H medium borderline
KN540830.1_FGP005 Flavonoid F3H medium borderline
KN541210.1_FGP001 Flavonoid F3H medium borderline
KN541210.1_FGP003 Flavonoid F3H low borderline
KN541837.1_FGP001 Flavonoid F3H medium borderline
KN541851.1_FGP001 Flavonoid F3H medium borderline
KN542261.1_FGP001 Flavonoid F3H medium borderline
KN542261.1_FGP002 Flavonoid F3H medium borderline
KN542261.1_FGP003 Flavonoid F3H medium borderline
KN543129.1_FGP001 Flavonoid F3H medium borderline