PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

2086
Candidate Protein Records
1740
Pathway-Level Records
4443
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
KN541842.1_FGP001 Alkaloid GES medium pass
KN541862.1_FGP001 Alkaloid GES medium pass
KN541924.1_FGP002 Alkaloid GES medium pass
KN541946.1_FGP001 Alkaloid GES medium pass
KN542104.1_FGP001 Alkaloid GES medium pass
KN542147.1_FGP001 Alkaloid GES medium pass
KN542329.1_FGP001 Alkaloid GES medium pass
KN542526.1_FGP001 Alkaloid GES medium pass
KN542945.1_FGP001 Alkaloid GES medium pass
KN543277.1_FGP001 Alkaloid GES medium pass
AMDW01027177.1_FGP001 Alkaloid GS low borderline
AMDW01033367.1_FGP001 Alkaloid GS medium pass
AMDW01040816.1_FGP001 Alkaloid GS high pass
AMDW01074352.1_FGP001 Alkaloid GS low borderline
KN538726.1_FGP042 Alkaloid GS low borderline
KN538739.1_FGP011 Alkaloid GS high pass
KN538777.1_FGP005 Alkaloid GS medium pass
KN538808.1_FGP008 Alkaloid GS low borderline
KN538824.1_FGP019 Alkaloid GS low borderline
KN539031.1_FGP017 Alkaloid GS high pass
KN539034.1_FGP015 Alkaloid GS medium pass
KN539034.1_FGP017 Alkaloid GS medium pass
KN539158.1_FGP005 Alkaloid GS low borderline
KN539324.1_FGP001 Alkaloid GS low borderline
KN539324.1_FGP003 Alkaloid GS low borderline
KN539324.1_FGP005 Alkaloid GS low borderline
KN539427.1_FGP001 Alkaloid GS medium pass
KN539669.1_FGP002 Alkaloid GS high pass
KN540171.1_FGP001 Alkaloid GS high pass
KN540171.1_FGP003 Alkaloid GS medium pass
KN540171.1_FGP006 Alkaloid GS high pass
KN540360.1_FGP006 Alkaloid GS low borderline
KN540794.1_FGP002 Alkaloid GS low borderline
KN541922.1_FGP002 Alkaloid GS low borderline
KN542084.1_FGP002 Alkaloid GS low borderline
KN542200.1_FGP002 Alkaloid GS low borderline
KN542262.1_FGP001 Alkaloid GS high pass
KN542673.1_FGP001 Alkaloid GS high pass
KN542940.1_FGP001 Alkaloid GS medium pass
KN543106.1_FGP001 Alkaloid GS high pass
KN543875.1_FGP001 Alkaloid GS low borderline
AMDW01014233.1_FGP001 Alkaloid H6H medium pass
AMDW01015012.1_FGP001 Alkaloid H6H medium borderline
AMDW01015807.1_FGP001 Alkaloid H6H low borderline
AMDW01018781.1_FGP001 Alkaloid H6H low borderline
AMDW01023443.1_FGP001 Alkaloid H6H low borderline
AMDW01029145.1_FGP001 Alkaloid H6H medium pass
AMDW01031556.1_FGP001 Alkaloid H6H medium borderline
AMDW01037062.1_FGP001 Alkaloid H6H low borderline
AMDW01054995.1_FGP001 Alkaloid H6H low borderline