PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

683
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
Reset
Gene Pathway Family Confidence Status
Psem4370920172150 Steroid CAS medium pass
Psem4397370191260 Steroid CAS medium pass
Psem4407990200030 Steroid CAS medium pass
Psem4408310200280 Steroid CAS medium pass
Psem4449790249020 Steroid CAS medium pass
Psem4674510283570 Steroid CAS medium pass
Psem4674520283630 Steroid CAS medium pass
Psem2180011720 Steroid CPD/CYP90A1 low borderline
Psem4104810113210 Steroid CPD/CYP90A1 medium borderline
Psem4290260140490 Steroid CPD/CYP90A1 medium borderline
Psem4292040141080 Steroid CPD/CYP90A1 medium borderline
Psem4326870151210 Steroid CPD/CYP90A1 low borderline
Psem4409340201460 Steroid CPD/CYP90A1 medium borderline
Psem4421230213600 Steroid CPD/CYP90A1 low borderline
Psem4432900226210 Steroid CPD/CYP90A1 medium borderline
Psem4456620258430 Steroid CPD/CYP90A1 medium borderline
Psem4720610295660 Steroid CPD/CYP90A1 low borderline
Psem4405530197930 Steroid CPI1 high pass
Psem4459840262740 Steroid CYP51G1 medium borderline
Psem4318010148240 Steroid CYP90D1 medium borderline
Psem4354510163940 Steroid CYP90D1 medium borderline
Psem4415320207970 Steroid CYP90D1 medium borderline
Psem4419220211480 Steroid CYP90D1 medium borderline
Psem4324600150450 Steroid DET2 low borderline
Psem4407980200020 Steroid DET2 medium pass
Psem4418990211230 Steroid DET2 medium pass
Psem4408830200850 Steroid DWF1 medium pass
Psem4464350269500 Steroid DWF1 medium pass
Psem10220001020 Steroid DWF4/CYP90B1 medium borderline
Psem2610014490 Steroid DWF4/CYP90B1 low borderline
Psem3120033560 Steroid DWF4/CYP90B1 medium borderline
Psem3120033570 Steroid DWF4/CYP90B1 low borderline
Psem3455700050430 Steroid DWF4/CYP90B1 low borderline
Psem3816170069020 Steroid DWF4/CYP90B1 low borderline
Psem3972580091470 Steroid DWF4/CYP90B1 low borderline
Psem4194570123970 Steroid DWF4/CYP90B1 low borderline
Psem4272920136610 Steroid DWF4/CYP90B1 low borderline
Psem4289460140170 Steroid DWF4/CYP90B1 low borderline
Psem4342520157570 Steroid DWF4/CYP90B1 medium borderline
Psem4343160157830 Steroid DWF4/CYP90B1 low borderline
Psem4349590160980 Steroid DWF4/CYP90B1 medium borderline
Psem4375740175540 Steroid DWF4/CYP90B1 medium borderline
Psem4380080178410 Steroid DWF4/CYP90B1 low borderline
Psem4393680187680 Steroid DWF4/CYP90B1 low borderline
Psem4394820188760 Steroid DWF4/CYP90B1 low borderline
Psem4400410193540 Steroid DWF4/CYP90B1 low borderline
Psem4423120215430 Steroid DWF4/CYP90B1 medium borderline
Psem4424160216870 Steroid DWF4/CYP90B1 low borderline
Psem4425590218000 Steroid DWF4/CYP90B1 low borderline
Psem4426810219270 Steroid DWF4/CYP90B1 low borderline