PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

683
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
Reset
Gene Pathway Family Confidence Status
Psem4437850232180 Steroid DWF4/CYP90B1 low borderline
Psem4439140233750 Steroid DWF4/CYP90B1 low borderline
Psem4440390235510 Steroid DWF4/CYP90B1 low borderline
Psem4442170237990 Steroid DWF4/CYP90B1 low borderline
Psem4447290245040 Steroid DWF4/CYP90B1 low borderline
Psem4459490262330 Steroid DWF4/CYP90B1 low borderline
Psem4463240267870 Steroid DWF4/CYP90B1 low borderline
Psem4466130271700 Steroid DWF4/CYP90B1 medium borderline
Psem4552210278510 Steroid DWF4/CYP90B1 low borderline
Psem4552220278540 Steroid DWF4/CYP90B1 low borderline
Psem4552780278550 Steroid DWF4/CYP90B1 low borderline
Psem4552810278570 Steroid DWF4/CYP90B1 low borderline
Psem4598150280490 Steroid DWF4/CYP90B1 low borderline
Psem4598160280500 Steroid DWF4/CYP90B1 low borderline
Psem4656680282310 Steroid DWF4/CYP90B1 low borderline
Psem4730296350 Steroid DWF4/CYP90B1 low borderline
Psem5020297120 Steroid DWF4/CYP90B1 low borderline
Psem7520306210 Steroid DWF4/CYP90B1 low borderline
Psem1590009430 Steroid DWF5 low borderline
Psem4225270127880 Steroid DWF5 medium pass
Psem4349690161130 Steroid DWF5 medium pass
Psem4688340286880 Steroid DWF5 medium borderline
Psem4688350286890 Steroid DWF5 medium borderline
Psem4261810134190 Steroid DWF7 medium pass
Psem4385000181260 Steroid DWF7 medium pass
Psem4428870221930 Steroid DWF7 medium pass
Psem4404440196830 Steroid FK low borderline
Psem4404990197330 Steroid FK high pass
Psem4446220243660 Steroid HYD1 high pass
Psem4273850136830 Steroid ROT3/CYP90C1 medium pass
Psem4311940146300 Steroid ROT3/CYP90C1 medium borderline
Psem4269880135760 Steroid SMO1/SMO2 medium pass
Psem4400290193460 Steroid SMO1/SMO2 medium pass
Psem4462770267060 Steroid SMO1/SMO2 medium pass
Psem11660007150 Steroid SMT1/SMT2/SMT3 medium pass
Psem3050032010 Steroid SMT1/SMT2/SMT3 medium pass
Psem3305010041760 Steroid SMT1/SMT2/SMT3 medium pass
Psem3944860084640 Steroid SMT1/SMT2/SMT3 low borderline
Psem4364010168670 Steroid SMT1/SMT2/SMT3 medium pass
Psem4433480226960 Steroid SMT1/SMT2/SMT3 medium pass
Psem4440210235290 Steroid SMT1/SMT2/SMT3 low borderline
Psem4442000237650 Steroid SMT1/SMT2/SMT3 medium pass
Psem4452520252900 Steroid SMT1/SMT2/SMT3 low borderline
Psem4456180257740 Steroid SMT1/SMT2/SMT3 low borderline
Psem4463660268370 Steroid SMT1/SMT2/SMT3 medium pass
Psem4598620280530 Steroid SMT1/SMT2/SMT3 medium pass
Psem4598640280570 Steroid SMT1/SMT2/SMT3 medium pass
Psem4647090282150 Steroid SMT1/SMT2/SMT3 low borderline
Psem4647100282180 Steroid SMT1/SMT2/SMT3 low borderline
Psem4721450295760 Steroid SMT1/SMT2/SMT3 low borderline