PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

683
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Psem4463420268110 Phenylpropanoid CAD medium pass
Psem4590280230 Phenylpropanoid CAD low borderline
Psem11360006010 Phenylpropanoid CCR medium borderline
Psem1430008640 Phenylpropanoid CCR low borderline
Psem4212660126140 Phenylpropanoid CCR low borderline
Psem4327490151480 Phenylpropanoid CCR medium borderline
Psem4442250238170 Phenylpropanoid CCR medium borderline
Psem4527360278020 Phenylpropanoid CCR low borderline
Psem4527380278030 Phenylpropanoid CCR low borderline
Psem5920300620 Phenylpropanoid CCR medium borderline
Psem5920300640 Phenylpropanoid CCR medium borderline
Psem9650316470 Phenylpropanoid CCR medium borderline
Psem10620002330 Phenylpropanoid CCoAOMT low borderline
Psem4115980117600 Phenylpropanoid CCoAOMT medium pass
Psem4352400162770 Phenylpropanoid CCoAOMT medium pass
Psem4394810188750 Phenylpropanoid CCoAOMT medium pass
Psem4408890200920 Phenylpropanoid CCoAOMT medium pass
Psem4436610230830 Phenylpropanoid CCoAOMT medium pass
Psem4451420251060 Phenylpropanoid CCoAOMT low borderline
Psem1680009700 Phenylpropanoid COMT medium pass
Psem3950640086050 Phenylpropanoid COMT medium pass
Psem4106060113900 Phenylpropanoid COMT medium pass
Psem4112390116670 Phenylpropanoid COMT medium pass
Psem4217160126520 Phenylpropanoid COMT medium pass
Psem4297290142250 Phenylpropanoid COMT medium pass
Psem4317290147870 Phenylpropanoid COMT medium pass
Psem4384660180950 Phenylpropanoid COMT medium pass
Psem4395960189830 Phenylpropanoid COMT low borderline
Psem4408310200250 Phenylpropanoid COMT medium pass
Psem4412650204680 Phenylpropanoid COMT low borderline
Psem4419240211510 Phenylpropanoid COMT low borderline
Psem4422010214420 Phenylpropanoid COMT medium pass
Psem4422010214430 Phenylpropanoid COMT low borderline
Psem4430440223290 Phenylpropanoid COMT medium pass
Psem4436790231050 Phenylpropanoid COMT low borderline
Psem4455480256870 Phenylpropanoid COMT medium pass
Psem4458290260390 Phenylpropanoid COMT medium pass
Psem4462870267230 Phenylpropanoid COMT low borderline
Psem4465030270170 Phenylpropanoid COMT medium pass
Psem4689030287130 Phenylpropanoid COMT medium pass
Psem4689050287200 Phenylpropanoid COMT medium pass
Psem4114930117390 Phenylpropanoid CSE medium pass
Psem4371890172820 Phenylpropanoid CSE medium pass
Psem4373950174430 Phenylpropanoid CSE low borderline
Psem4374370174670 Phenylpropanoid CSE medium pass
Psem4397050190930 Phenylpropanoid CSE medium pass
Psem4411630203740 Phenylpropanoid CSE medium pass
Psem4413830206100 Phenylpropanoid CSE medium pass
Psem4421180213520 Phenylpropanoid CSE medium pass
Psem4423020215310 Phenylpropanoid CSE medium pass