PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

683
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Psem3441960047600 Flavonoid IFS low borderline
Psem3644430060550 Flavonoid IFS low borderline
Psem3859390073750 Flavonoid IFS medium borderline
Psem4104810113210 Flavonoid IFS medium borderline
Psem4140880119370 Flavonoid IFS low borderline
Psem4253270132470 Flavonoid IFS medium borderline
Psem4258290133310 Flavonoid IFS medium borderline
Psem4273850136830 Flavonoid IFS low borderline
Psem4289460140170 Flavonoid IFS low borderline
Psem4290260140470 Flavonoid IFS medium borderline
Psem4290260140490 Flavonoid IFS medium borderline
Psem4302100143570 Flavonoid IFS low borderline
Psem4318010148240 Flavonoid IFS low borderline
Psem4326870151210 Flavonoid IFS medium borderline
Psem4343160157830 Flavonoid IFS medium borderline
Psem4353420163290 Flavonoid IFS medium borderline
Psem4354510163940 Flavonoid IFS low borderline
Psem4371280172330 Flavonoid IFS medium borderline
Psem4371910172860 Flavonoid IFS medium borderline
Psem4375740175540 Flavonoid IFS low borderline
Psem4386250182270 Flavonoid IFS medium borderline
Psem4394820188760 Flavonoid IFS medium borderline
Psem4412460204520 Flavonoid IFS low borderline
Psem4414070206470 Flavonoid IFS low borderline
Psem4415320207970 Flavonoid IFS low borderline
Psem4419220211480 Flavonoid IFS low borderline
Psem4420130212510 Flavonoid IFS medium pass
Psem4423120215430 Flavonoid IFS low borderline
Psem4424150216850 Flavonoid IFS low borderline
Psem4424160216870 Flavonoid IFS low borderline
Psem4425380217840 Flavonoid IFS low borderline
Psem4425590218000 Flavonoid IFS medium borderline
Psem4432900226210 Flavonoid IFS medium borderline
Psem4435550229610 Flavonoid IFS medium borderline
Psem4437850232180 Flavonoid IFS low borderline
Psem4438740233220 Flavonoid IFS low borderline
Psem4441310236760 Flavonoid IFS medium borderline
Psem4456620258430 Flavonoid IFS low borderline
Psem4459490262330 Flavonoid IFS medium borderline
Psem4552210278510 Flavonoid IFS medium borderline
Psem4552220278540 Flavonoid IFS medium borderline
Psem4552780278550 Flavonoid IFS low borderline
Psem4552810278570 Flavonoid IFS low borderline
Psem4598150280490 Flavonoid IFS low borderline
Psem4598160280500 Flavonoid IFS low borderline
Psem4718250295150 Flavonoid IFS low borderline
Psem4718260295190 Flavonoid IFS low borderline
Psem4730296350 Flavonoid IFS medium borderline
Psem6710303680 Flavonoid IFS medium borderline
Psem8770311270 Flavonoid IFS medium borderline