PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

683
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Psem2862940017910 Flavonoid PAL medium pass
Psem3877960075600 Flavonoid PAL medium pass
Psem4185150122440 Flavonoid PAL medium pass
Psem4355640164500 Flavonoid PAL low borderline
Psem4355760164600 Flavonoid PAL low borderline
Psem4385690181820 Flavonoid PAL medium pass
Psem4419770212060 Flavonoid PAL medium pass
Psem4445830243080 Flavonoid PAL medium pass
Psem4490275950 Flavonoid PAL high pass
Psem2880020018490 Flavonoid UFGT medium pass
Psem2910023840 Flavonoid UFGT medium pass
Psem4165680120590 Flavonoid UFGT low borderline
Psem4237970129710 Flavonoid UFGT medium pass
Psem4275840137180 Flavonoid UFGT high pass
Psem4286540139440 Flavonoid UFGT medium pass
Psem4324540150440 Flavonoid UFGT medium pass
Psem4346660159700 Flavonoid UFGT medium pass
Psem4354120163640 Flavonoid UFGT high pass
Psem4355400164340 Flavonoid UFGT high pass
Psem4355400164350 Flavonoid UFGT high pass
Psem4361150167370 Flavonoid UFGT medium pass
Psem4361970167730 Flavonoid UFGT medium pass
Psem4362010167740 Flavonoid UFGT medium pass
Psem4365000169230 Flavonoid UFGT medium pass
Psem4367170169980 Flavonoid UFGT medium pass
Psem4379950178260 Flavonoid UFGT medium pass
Psem4384310180680 Flavonoid UFGT medium pass
Psem4386090182130 Flavonoid UFGT medium pass
Psem4391860185990 Flavonoid UFGT high pass
Psem4401890194530 Flavonoid UFGT medium pass
Psem4407130199360 Flavonoid UFGT low borderline
Psem4408890200910 Flavonoid UFGT medium pass
Psem4413820206090 Flavonoid UFGT low borderline
Psem4413850206180 Flavonoid UFGT medium pass
Psem4418860211120 Flavonoid UFGT medium pass
Psem4419010211280 Flavonoid UFGT medium pass
Psem4439660234360 Flavonoid UFGT medium pass
Psem4441920237560 Flavonoid UFGT medium pass
Psem4446220243670 Flavonoid UFGT medium pass
Psem4447250244960 Flavonoid UFGT high pass
Psem4448600247100 Flavonoid UFGT low borderline
Psem4449630248780 Flavonoid UFGT high pass
Psem4453360254170 Flavonoid UFGT high pass
Psem4461450265120 Flavonoid UFGT medium pass
Psem4463100267640 Flavonoid UFGT medium pass
Psem4468210273980 Flavonoid UFGT low borderline
Psem4469070274950 Flavonoid UFGT medium pass
Psem4511680277140 Flavonoid UFGT high pass
Psem4511700277160 Flavonoid UFGT high pass
Psem4670780282970 Flavonoid UFGT medium pass