PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

683
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Psem3877960075600 Phenylpropanoid PAL medium pass
Psem4185150122440 Phenylpropanoid PAL medium pass
Psem4355640164500 Phenylpropanoid PAL low borderline
Psem4355760164600 Phenylpropanoid PAL low borderline
Psem4385690181820 Phenylpropanoid PAL medium pass
Psem4419770212060 Phenylpropanoid PAL medium pass
Psem4445830243080 Phenylpropanoid PAL medium pass
Psem4490275950 Phenylpropanoid PAL high pass
Psem10490001890 Phenylpropanoid POD medium pass
Psem11650007030 Phenylpropanoid POD low borderline
Psem11650007070 Phenylpropanoid POD medium pass
Psem1730009860 Phenylpropanoid POD medium pass
Psem3746360062010 Phenylpropanoid POD medium pass
Psem4082710108140 Phenylpropanoid POD medium pass
Psem4097380110870 Phenylpropanoid POD medium pass
Psem4097380110880 Phenylpropanoid POD medium pass
Psem4112560116790 Phenylpropanoid POD medium pass
Psem4182040122200 Phenylpropanoid POD medium pass
Psem4190740123230 Phenylpropanoid POD medium pass
Psem4193560123820 Phenylpropanoid POD medium pass
Psem4197120124560 Phenylpropanoid POD medium pass
Psem4209500125960 Phenylpropanoid POD medium pass
Psem4228700128540 Phenylpropanoid POD medium pass
Psem4244650131230 Phenylpropanoid POD medium pass
Psem4259430133540 Phenylpropanoid POD medium pass
Psem4304560144250 Phenylpropanoid POD medium pass
Psem4317080147770 Phenylpropanoid POD medium pass
Psem4320710149260 Phenylpropanoid POD medium pass
Psem4338390155740 Phenylpropanoid POD medium pass
Psem4338940156010 Phenylpropanoid POD medium pass
Psem4345810159070 Phenylpropanoid POD medium pass
Psem4345810159080 Phenylpropanoid POD medium pass
Psem4350730161790 Phenylpropanoid POD medium pass
Psem4355880164700 Phenylpropanoid POD medium pass
Psem4368340170660 Phenylpropanoid POD medium pass
Psem4375410175380 Phenylpropanoid POD medium pass
Psem4375410175390 Phenylpropanoid POD medium pass
Psem4384170180590 Phenylpropanoid POD medium pass
Psem4385460181580 Phenylpropanoid POD medium pass
Psem4385630181760 Phenylpropanoid POD medium pass
Psem4386710182690 Phenylpropanoid POD medium pass
Psem4391850185960 Phenylpropanoid POD medium pass
Psem4393530187520 Phenylpropanoid POD medium pass
Psem4394320188310 Phenylpropanoid POD medium pass
Psem4400630193590 Phenylpropanoid POD medium pass
Psem4407720199800 Phenylpropanoid POD medium pass
Psem4409900202140 Phenylpropanoid POD low borderline
Psem4410430202600 Phenylpropanoid POD medium pass
Psem4412490204540 Phenylpropanoid POD medium pass
Psem4415520208190 Phenylpropanoid POD medium pass