PlantSME Plant secondary metabolism enzyme database

Plagiochila semidecurrens (plagiochila_semidecurrens)

Imported from atlas release summary for Plagiochila semidecurrens.

962
Candidate Protein Records
683
Pathway-Level Records
1791
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (93)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 188 12 POD (84) View species results
Terpenoid pathway 169 17 BAHD (62) View species results
Alkaloid pathway 132 18 NMT (21) View species results
Flavonoid pathway 85 10 UFGT (42) View species results
Rosmarinic acid pathway 72 7 C4H (35) View species results
Steroid pathway 37 13 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 633 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 144 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Psem4429130222280 Alkaloid STR low borderline
Psem4445280242280 Alkaloid STR low borderline
Psem4448220246490 Alkaloid STR low borderline
Psem4448630247150 Alkaloid STR low borderline
Psem4451450251110 Alkaloid STR medium pass
Psem4455650257110 Alkaloid STR low borderline
Psem4456490258130 Alkaloid STR low borderline
Psem4459830262730 Alkaloid STR low borderline
Psem4462540266770 Alkaloid STR low borderline
Psem4465720271070 Alkaloid STR medium pass
Psem4466530272010 Alkaloid STR low borderline
Psem4467930273610 Alkaloid STR low borderline
Psem4516070277390 Alkaloid STR low borderline
Psem4516080277410 Alkaloid STR low borderline
Psem4590280290 Alkaloid STR low borderline
Psem4692480288150 Alkaloid STR medium pass
Psem4692490288230 Alkaloid STR medium pass
Psem5210297760 Alkaloid STR low borderline
Psem5830300420 Alkaloid STR medium pass
Psem3120033560 Alkaloid T16H medium borderline
Psem3120033570 Alkaloid T16H medium borderline
Psem3441960047600 Alkaloid T16H low borderline
Psem3816170069020 Alkaloid T16H medium borderline
Psem4036980097200 Alkaloid T16H medium borderline
Psem4289460140170 Alkaloid T16H low borderline
Psem4290260140490 Alkaloid T16H medium borderline
Psem4387250183160 Alkaloid T16H medium borderline
Psem4394820188760 Alkaloid T16H medium borderline
Psem4438740233220 Alkaloid T16H low borderline
Psem4439140233750 Alkaloid T16H low borderline
Psem4459840262740 Alkaloid T16H medium borderline
Psem4718250295150 Alkaloid T16H low borderline
Psem4718260295190 Alkaloid T16H low borderline
Psem2610014490 Alkaloid T3O medium borderline
Psem3644430060550 Alkaloid T3O medium pass
Psem4081430107630 Alkaloid T3O medium borderline
Psem4253270132470 Alkaloid T3O medium borderline
Psem4318010148240 Alkaloid T3O medium pass
Psem4326870151210 Alkaloid T3O medium borderline
Psem4333710153770 Alkaloid T3O low borderline
Psem4342520157570 Alkaloid T3O medium pass
Psem4343160157830 Alkaloid T3O medium borderline
Psem4354510163940 Alkaloid T3O medium pass
Psem4371280172330 Alkaloid T3O medium borderline
Psem4371910172860 Alkaloid T3O medium borderline
Psem4394300188260 Alkaloid T3O low borderline
Psem4408230200150 Alkaloid T3O medium pass
Psem4409340201460 Alkaloid T3O medium pass
Psem4419220211480 Alkaloid T3O medium pass
Psem4423120215430 Alkaloid T3O medium pass