PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3724
Candidate Protein Records
3176
Pathway-Level Records
7645
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
XP_023894412.1 Terpenoid FPPS medium pass
XP_023902394.1 Terpenoid FPPS low borderline
XP_023904408.1 Terpenoid FPPS low borderline
XP_023904409.1 Terpenoid FPPS low borderline
XP_023904410.1 Terpenoid FPPS low borderline
XP_023906373.1 Terpenoid FPPS medium pass
XP_023906374.1 Terpenoid FPPS medium pass
XP_023906377.1 Terpenoid FPPS medium pass
XP_023906378.1 Terpenoid FPPS medium pass
XP_023906379.1 Terpenoid FPPS medium pass
XP_023913409.1 Terpenoid FPPS medium borderline
XP_023919535.1 Terpenoid FPPS medium pass
XP_023927416.1 Terpenoid FPPS medium pass
XP_023927825.1 Terpenoid FPPS medium pass
XP_023876632.1 Terpenoid GGPPS low borderline
XP_023876882.1 Terpenoid GGPPS medium borderline
XP_023876883.1 Terpenoid GGPPS medium borderline
XP_023880382.1 Terpenoid GGPPS medium borderline
XP_023880543.1 Terpenoid GGPPS low borderline
XP_023880546.1 Terpenoid GGPPS low borderline
XP_023880808.1 Terpenoid GGPPS low borderline
XP_023881254.1 Terpenoid GGPPS medium borderline
XP_023881431.1 Terpenoid GGPPS medium borderline
XP_023881877.1 Terpenoid GGPPS medium borderline
XP_023881878.1 Terpenoid GGPPS medium borderline
XP_023881879.1 Terpenoid GGPPS medium borderline
XP_023887658.1 Terpenoid GGPPS medium borderline
XP_023888195.1 Terpenoid GGPPS medium borderline
XP_023888708.1 Terpenoid GGPPS medium borderline
XP_023890982.1 Terpenoid GGPPS medium borderline
XP_023899349.1 Terpenoid GGPPS medium borderline
XP_023921485.1 Terpenoid GGPPS medium borderline
XP_023921486.1 Terpenoid GGPPS medium borderline
XP_023877809.1 Terpenoid HDR/IspH high pass
XP_023882670.1 Terpenoid HDR/IspH low borderline
XP_023892077.1 Terpenoid HDR/IspH medium pass
XP_023919190.1 Terpenoid HDR/IspH high pass
XP_023921046.1 Terpenoid HDR/IspH low borderline
XP_023928793.1 Terpenoid HDR/IspH high pass
XP_023926854.1 Terpenoid HDS/IspG high pass
XP_023926855.1 Terpenoid HDS/IspG high pass
XP_023890731.1 Terpenoid HMGR low borderline
XP_023891013.1 Terpenoid HMGR medium pass
XP_023914810.1 Terpenoid HMGR low borderline
XP_023918405.1 Terpenoid HMGR medium pass
XP_023923620.1 Terpenoid HMGR low borderline
XP_023891797.1 Terpenoid HMGS high pass
XP_023905711.1 Terpenoid HMGS high pass
XP_023905712.1 Terpenoid HMGS high pass
XP_023906465.1 Terpenoid HMGS high pass