PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
XP_023898693.1 Alkaloid 7DLGT low borderline
XP_023898718.1 Alkaloid 7DLGT low borderline
XP_023898720.1 Alkaloid 7DLGT low borderline
XP_023898731.1 Alkaloid 7DLGT low borderline
XP_023898732.1 Alkaloid 7DLGT low borderline
XP_023898740.1 Alkaloid 7DLGT medium pass
XP_023898879.1 Alkaloid 7DLGT high pass
XP_023899281.1 Alkaloid 7DLGT high pass
XP_023899775.1 Alkaloid 7DLGT low borderline
XP_023900256.1 Alkaloid 7DLGT low borderline
XP_023900292.1 Alkaloid 7DLGT medium pass
XP_023900311.1 Alkaloid 7DLGT medium pass
XP_023900312.1 Alkaloid 7DLGT medium pass
XP_023900408.1 Alkaloid 7DLGT medium pass
XP_023900439.1 Alkaloid 7DLGT low borderline
XP_023900688.1 Alkaloid 7DLGT medium pass
XP_023900739.1 Alkaloid 7DLGT low borderline
XP_023900745.1 Alkaloid 7DLGT low borderline
XP_023900794.1 Alkaloid 7DLGT medium pass
XP_023901249.1 Alkaloid 7DLGT medium pass
XP_023901301.1 Alkaloid 7DLGT medium pass
XP_023902303.1 Alkaloid 7DLGT low borderline
XP_023902304.1 Alkaloid 7DLGT low borderline
XP_023902322.1 Alkaloid 7DLGT low borderline
XP_023902337.1 Alkaloid 7DLGT medium pass
XP_023902351.1 Alkaloid 7DLGT low borderline
XP_023902357.1 Alkaloid 7DLGT low borderline
XP_023903326.1 Alkaloid 7DLGT medium pass
XP_023903332.1 Alkaloid 7DLGT medium pass
XP_023903649.1 Alkaloid 7DLGT medium pass
XP_023903723.1 Alkaloid 7DLGT medium pass
XP_023904401.1 Alkaloid 7DLGT low borderline
XP_023904689.1 Alkaloid 7DLGT low borderline
XP_023904690.1 Alkaloid 7DLGT low borderline
XP_023904691.1 Alkaloid 7DLGT low borderline
XP_023904692.1 Alkaloid 7DLGT low borderline
XP_023905005.1 Alkaloid 7DLGT medium pass
XP_023905104.1 Alkaloid 7DLGT medium pass
XP_023905495.1 Alkaloid 7DLGT low borderline
XP_023905528.1 Alkaloid 7DLGT low borderline
XP_023905553.1 Alkaloid 7DLGT low borderline
XP_023905554.1 Alkaloid 7DLGT low borderline
XP_023905565.1 Alkaloid 7DLGT medium pass
XP_023906491.1 Alkaloid 7DLGT low borderline
XP_023906499.1 Alkaloid 7DLGT low borderline
XP_023906507.1 Alkaloid 7DLGT low borderline
XP_023906561.1 Alkaloid 7DLGT low borderline
XP_023906567.1 Alkaloid 7DLGT low borderline
XP_023907645.1 Alkaloid 7DLGT medium pass
XP_023907646.1 Alkaloid 7DLGT medium pass