PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1104
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Rcrescaffold182290193380 Flavonoid F3H low borderline
Rcrescaffold18760195880 Flavonoid F3H low borderline
Rcrescaffold195930198380 Flavonoid F3H low borderline
Rcrescaffold21640205250 Flavonoid F3H medium borderline
Rcrescaffold26430220150 Flavonoid F3H medium borderline
Rcrescaffold269500222430 Flavonoid F3H medium borderline
Rcrescaffold270020223170 Flavonoid F3H medium borderline
Rcrescaffold282980226650 Flavonoid F3H medium borderline
Rcrescaffold293440229400 Flavonoid F3H medium borderline
Rcrescaffold318810236330 Flavonoid F3H medium borderline
Rcrescaffold32070236570 Flavonoid F3H medium borderline
Rcrescaffold32070236670 Flavonoid F3H low borderline
Rcrescaffold32070237110 Flavonoid F3H medium borderline
Rcrescaffold341170240400 Flavonoid F3H medium borderline
Rcrescaffold351400241590 Flavonoid F3H medium pass
Rcrescaffold36180244430 Flavonoid F3H medium borderline
Rcrescaffold36180244440 Flavonoid F3H low borderline
Rcrescaffold370740247780 Flavonoid F3H medium pass
Rcrescaffold38990251020 Flavonoid F3H medium borderline
Rcrescaffold39430251470 Flavonoid F3H medium pass
Rcrescaffold39540252320 Flavonoid F3H medium borderline
Rcrescaffold41590254530 Flavonoid F3H low borderline
Rcrescaffold41590254540 Flavonoid F3H low borderline
Rcrescaffold41970255480 Flavonoid F3H medium borderline
Rcrescaffold49720264500 Flavonoid F3H medium borderline
Rcrescaffold5360268940 Flavonoid F3H medium borderline
Rcrescaffold5360268950 Flavonoid F3H medium borderline
Rcrescaffold54670270170 Flavonoid F3H low borderline
Rcrescaffold54670270210 Flavonoid F3H medium borderline
Rcrescaffold56770272070 Flavonoid F3H medium borderline
Rcrescaffold56770272090 Flavonoid F3H medium borderline
Rcrescaffold61350279940 Flavonoid F3H medium pass
Rcrescaffold64370284370 Flavonoid F3H medium borderline
Rcrescaffold6910292200 Flavonoid F3H low borderline
Rcrescaffold80550301810 Flavonoid F3H medium borderline
Rcrescaffold80550301830 Flavonoid F3H medium borderline
Rcrescaffold80550301850 Flavonoid F3H medium borderline
Rcrescaffold91940310920 Flavonoid F3H medium borderline
Rcrescaffold97400314400 Flavonoid F3H medium borderline