PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1104
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Rcrescaffold10230001960 Alkaloid T3O medium borderline
Rcrescaffold1292560020170 Alkaloid T3O low borderline
Rcrescaffold1297570021970 Alkaloid T3O medium borderline
Rcrescaffold1297570021980 Alkaloid T3O medium borderline
Rcrescaffold130500023680 Alkaloid T3O medium borderline
Rcrescaffold130500023690 Alkaloid T3O medium borderline
Rcrescaffold130500023700 Alkaloid T3O medium borderline
Rcrescaffold1339610028610 Alkaloid T3O low borderline
Rcrescaffold1348330030850 Alkaloid T3O medium borderline
Rcrescaffold1348330030870 Alkaloid T3O medium borderline
Rcrescaffold1357560036460 Alkaloid T3O medium borderline
Rcrescaffold1357560036870 Alkaloid T3O medium borderline
Rcrescaffold1358800038110 Alkaloid T3O medium pass
Rcrescaffold1361080039930 Alkaloid T3O low borderline
Rcrescaffold1365010040920 Alkaloid T3O medium borderline
Rcrescaffold1372390044190 Alkaloid T3O medium borderline
Rcrescaffold1375580046550 Alkaloid T3O medium borderline
Rcrescaffold1382640052910 Alkaloid T3O medium borderline
Rcrescaffold1382980056720 Alkaloid T3O medium pass
Rcrescaffold1384710071620 Alkaloid T3O medium pass
Rcrescaffold1384710071640 Alkaloid T3O low borderline
Rcrescaffold1384890075580 Alkaloid T3O medium borderline
Rcrescaffold1384900075610 Alkaloid T3O low borderline
Rcrescaffold1384900075880 Alkaloid T3O medium borderline
Rcrescaffold1385410083650 Alkaloid T3O medium borderline
Rcrescaffold1385520085060 Alkaloid T3O medium pass
Rcrescaffold1387400102850 Alkaloid T3O low borderline
Rcrescaffold1388030107730 Alkaloid T3O low borderline
Rcrescaffold1388050107790 Alkaloid T3O medium borderline
Rcrescaffold1388270109300 Alkaloid T3O medium borderline
Rcrescaffold1388700111780 Alkaloid T3O low borderline
Rcrescaffold1390090121320 Alkaloid T3O medium borderline
Rcrescaffold1390630127590 Alkaloid T3O medium pass
Rcrescaffold1391240134870 Alkaloid T3O medium borderline
Rcrescaffold1391240135150 Alkaloid T3O low borderline
Rcrescaffold1391550141460 Alkaloid T3O medium pass
Rcrescaffold1391590143500 Alkaloid T3O low borderline
Rcrescaffold1391660144490 Alkaloid T3O low borderline
Rcrescaffold1391700144940 Alkaloid T3O medium borderline
Rcrescaffold1391700144960 Alkaloid T3O low borderline
Rcrescaffold1391990148420 Alkaloid T3O low borderline
Rcrescaffold1394070160790 Alkaloid T3O medium borderline
Rcrescaffold1394460163980 Alkaloid T3O medium borderline
Rcrescaffold1395080168160 Alkaloid T3O medium pass
Rcrescaffold1395950173570 Alkaloid T3O medium pass
Rcrescaffold142830176240 Alkaloid T3O medium pass
Rcrescaffold148260179180 Alkaloid T3O medium borderline
Rcrescaffold148260179190 Alkaloid T3O medium borderline
Rcrescaffold166950186060 Alkaloid T3O medium pass
Rcrescaffold18910196650 Alkaloid T3O medium borderline