PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1104
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
Reset
Gene Pathway Family Confidence Status Best Target
Rcrescaffold2190207880 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Rcrescaffold21980208360 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Rcrescaffold231870212770 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Rcrescaffold235080214260 Flavonoid UFGT medium pass UFGT__00004__sp_Q96493_UFOG_GENTR
Rcrescaffold305530232940 Flavonoid UFGT medium pass UFGT__00005__sp_Q9LVW3_AXYLT_ARATH
Rcrescaffold318680236180 Flavonoid UFGT high pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Rcrescaffold318680236190 Flavonoid UFGT high pass UFGT__00004__sp_Q96493_UFOG_GENTR
Rcrescaffold33250239040 Flavonoid UFGT low borderline UFGT__00005__sp_Q9LVW3_AXYLT_ARATH
Rcrescaffold341170240440 Flavonoid UFGT medium pass UFGT__00004__sp_Q96493_UFOG_GENTR
Rcrescaffold36090243440 Flavonoid UFGT medium pass UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Rcrescaffold361980245290 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Rcrescaffold361980245320 Flavonoid UFGT medium pass UFGT__00004__sp_Q96493_UFOG_GENTR
Rcrescaffold50180265450 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Rcrescaffold5120266230 Flavonoid UFGT high pass UFGT__00001__sp_P51094_UFOG_VITVI
Rcrescaffold5230267280 Flavonoid UFGT high pass UFGT__00004__sp_Q96493_UFOG_GENTR
Rcrescaffold5230267470 Flavonoid UFGT medium pass UFGT__00004__sp_Q96493_UFOG_GENTR
Rcrescaffold5360268740 Flavonoid UFGT medium pass UFGT__00004__sp_Q96493_UFOG_GENTR
Rcrescaffold5360268870 Flavonoid UFGT high pass UFGT__00001__sp_P51094_UFOG_VITVI
Rcrescaffold57490273570 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Rcrescaffold59560278300 Flavonoid UFGT medium pass UFGT__00001__sp_P51094_UFOG_VITVI
Rcrescaffold67660289060 Flavonoid UFGT high pass UFGT__00005__sp_Q9LVW3_AXYLT_ARATH
Rcrescaffold68950290780 Flavonoid UFGT medium pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Rcrescaffold79610299960 Flavonoid UFGT medium pass UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Rcrescaffold79750300150 Flavonoid UFGT medium pass UFGT__00003__sp_Q66PF5_UFOG1_FRAAN
Rcrescaffold87630307860 Flavonoid UFGT medium pass UFGT__00002__sp_Q5UL10_UFOG2_FRAAN
Rcrescaffold92170311060 Flavonoid UFGT high pass UFGT__00001__sp_P51094_UFOG_VITVI