PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1486
Candidate Protein Records
1104
Pathway-Level Records
2825
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Rcrescaffold142830176240 Alkaloid T3O medium pass
Rcrescaffold148260179180 Alkaloid T3O medium borderline
Rcrescaffold148260179190 Alkaloid T3O medium borderline
Rcrescaffold166950186060 Alkaloid T3O medium pass
Rcrescaffold18910196650 Alkaloid T3O medium borderline
Rcrescaffold189490197020 Alkaloid T3O medium pass
Rcrescaffold196410198570 Alkaloid T3O medium pass
Rcrescaffold198190199050 Alkaloid T3O medium borderline
Rcrescaffold208720202870 Alkaloid T3O low borderline
Rcrescaffold217190206020 Alkaloid T3O medium borderline
Rcrescaffold217190206050 Alkaloid T3O medium borderline
Rcrescaffold217190206160 Alkaloid T3O medium borderline
Rcrescaffold24290216130 Alkaloid T3O medium pass
Rcrescaffold243690216220 Alkaloid T3O medium pass
Rcrescaffold2480217400 Alkaloid T3O medium borderline
Rcrescaffold25120218430 Alkaloid T3O medium pass
Rcrescaffold285990227160 Alkaloid T3O medium pass
Rcrescaffold286450227300 Alkaloid T3O medium pass
Rcrescaffold30090231540 Alkaloid T3O medium pass
Rcrescaffold32600237850 Alkaloid T3O medium pass
Rcrescaffold32640238280 Alkaloid T3O medium borderline
Rcrescaffold357000242940 Alkaloid T3O medium borderline
Rcrescaffold36090243210 Alkaloid T3O low borderline
Rcrescaffold36840247270 Alkaloid T3O medium borderline
Rcrescaffold37190247970 Alkaloid T3O medium borderline
Rcrescaffold37320248210 Alkaloid T3O medium borderline
Rcrescaffold38140249800 Alkaloid T3O medium pass
Rcrescaffold423640255850 Alkaloid T3O medium borderline
Rcrescaffold45350259370 Alkaloid T3O medium pass
Rcrescaffold45350259620 Alkaloid T3O medium pass
Rcrescaffold49720264900 Alkaloid T3O medium borderline
Rcrescaffold511520266040 Alkaloid T3O medium borderline
Rcrescaffold533870268300 Alkaloid T3O medium borderline
Rcrescaffold533870268310 Alkaloid T3O medium borderline
Rcrescaffold533870268320 Alkaloid T3O medium borderline
Rcrescaffold64370284460 Alkaloid T3O low borderline
Rcrescaffold64580285460 Alkaloid T3O medium pass
Rcrescaffold64580285690 Alkaloid T3O low borderline
Rcrescaffold75350296450 Alkaloid T3O medium borderline
Rcrescaffold80200301180 Alkaloid T3O medium borderline
Rcrescaffold83070304030 Alkaloid T3O medium borderline
Rcrescaffold86060306970 Alkaloid T3O medium borderline
Rcrescaffold87360307510 Alkaloid T3O medium borderline
Rcrescaffold90320310460 Alkaloid T3O low borderline
Rcrescaffold9440311760 Alkaloid T3O medium pass
Rcrescaffold1391560142530 Alkaloid TDC low borderline
Rcrescaffold270020222960 Alkaloid TDC medium borderline
Rcrescaffold1297040021720 Alkaloid TRI/TRII medium pass
Rcrescaffold1367560042520 Alkaloid TRI/TRII low borderline
Rcrescaffold1381770050280 Alkaloid TRI/TRII low borderline