PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1104
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Rcrescaffold182890194370 Alkaloid 7DLGT low borderline
Rcrescaffold187330195740 Alkaloid 7DLGT low borderline
Rcrescaffold19170197310 Alkaloid 7DLGT medium pass
Rcrescaffold200770200170 Alkaloid 7DLGT low borderline
Rcrescaffold208720201890 Alkaloid 7DLGT low borderline
Rcrescaffold2190207880 Alkaloid 7DLGT medium pass
Rcrescaffold21980208360 Alkaloid 7DLGT low borderline
Rcrescaffold231870212770 Alkaloid 7DLGT low borderline
Rcrescaffold235080214260 Alkaloid 7DLGT low borderline
Rcrescaffold305530232940 Alkaloid 7DLGT low borderline
Rcrescaffold310480234960 Alkaloid 7DLGT low borderline
Rcrescaffold318680236180 Alkaloid 7DLGT medium pass
Rcrescaffold318680236190 Alkaloid 7DLGT medium pass
Rcrescaffold33250239040 Alkaloid 7DLGT low borderline
Rcrescaffold341170240440 Alkaloid 7DLGT low borderline
Rcrescaffold36090243440 Alkaloid 7DLGT low borderline
Rcrescaffold361980245290 Alkaloid 7DLGT low borderline
Rcrescaffold361980245320 Alkaloid 7DLGT low borderline
Rcrescaffold50180265450 Alkaloid 7DLGT low borderline
Rcrescaffold5120266230 Alkaloid 7DLGT medium pass
Rcrescaffold5230267280 Alkaloid 7DLGT low borderline
Rcrescaffold5230267470 Alkaloid 7DLGT low borderline
Rcrescaffold5360268740 Alkaloid 7DLGT high pass
Rcrescaffold5360268870 Alkaloid 7DLGT medium pass
Rcrescaffold57490273570 Alkaloid 7DLGT high pass
Rcrescaffold59560278300 Alkaloid 7DLGT low borderline
Rcrescaffold62060280560 Alkaloid 7DLGT low borderline
Rcrescaffold67660289060 Alkaloid 7DLGT low borderline
Rcrescaffold68950290780 Alkaloid 7DLGT medium pass
Rcrescaffold79610299960 Alkaloid 7DLGT high pass
Rcrescaffold79750300150 Alkaloid 7DLGT low borderline
Rcrescaffold87630307860 Alkaloid 7DLGT low borderline
Rcrescaffold92170311060 Alkaloid 7DLGT low borderline
Rcrescaffold126180016130 Alkaloid 7DLH medium borderline
Rcrescaffold1351010032360 Alkaloid 7DLH medium borderline
Rcrescaffold1351010032390 Alkaloid 7DLH medium borderline
Rcrescaffold1357560036190 Alkaloid 7DLH medium borderline
Rcrescaffold1377940048500 Alkaloid 7DLH medium borderline
Rcrescaffold1381770050310 Alkaloid 7DLH medium borderline
Rcrescaffold1391630143930 Alkaloid 7DLH medium borderline
Rcrescaffold16480185150 Alkaloid 7DLH medium borderline
Rcrescaffold267300221480 Alkaloid 7DLH medium borderline
Rcrescaffold270020222510 Alkaloid 7DLH medium borderline
Rcrescaffold295330230080 Alkaloid 7DLH medium borderline
Rcrescaffold30030231220 Alkaloid 7DLH medium borderline
Rcrescaffold4130254310 Alkaloid 7DLH medium borderline
Rcrescaffold43100256460 Alkaloid 7DLH medium borderline
Rcrescaffold495320264050 Alkaloid 7DLH medium borderline
Rcrescaffold54670270010 Alkaloid 7DLH medium borderline
Rcrescaffold55990271160 Alkaloid 7DLH medium borderline