PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1104
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Rcrescaffold1297570021980 Rosmarinic Acid C4H low borderline
Rcrescaffold1299520022470 Rosmarinic Acid C4H low borderline
Rcrescaffold130170022800 Rosmarinic Acid C4H low borderline
Rcrescaffold130500023590 Rosmarinic Acid C4H low borderline
Rcrescaffold130500023680 Rosmarinic Acid C4H low borderline
Rcrescaffold130500023690 Rosmarinic Acid C4H low borderline
Rcrescaffold130500023700 Rosmarinic Acid C4H medium pass
Rcrescaffold1339610028610 Rosmarinic Acid C4H low borderline
Rcrescaffold1348330030850 Rosmarinic Acid C4H medium pass
Rcrescaffold1348330030870 Rosmarinic Acid C4H medium pass
Rcrescaffold1351010032360 Rosmarinic Acid C4H low borderline
Rcrescaffold1351010032380 Rosmarinic Acid C4H low borderline
Rcrescaffold1351010032390 Rosmarinic Acid C4H low borderline
Rcrescaffold1351010032400 Rosmarinic Acid C4H low borderline
Rcrescaffold1351010032660 Rosmarinic Acid C4H low borderline
Rcrescaffold1357560036460 Rosmarinic Acid C4H medium pass
Rcrescaffold1357560036480 Rosmarinic Acid C4H low borderline
Rcrescaffold1357560036870 Rosmarinic Acid C4H medium pass
Rcrescaffold1365010040920 Rosmarinic Acid C4H medium pass
Rcrescaffold1372390044190 Rosmarinic Acid C4H medium pass
Rcrescaffold1374450045810 Rosmarinic Acid C4H low borderline
Rcrescaffold1375580046550 Rosmarinic Acid C4H low borderline
Rcrescaffold1376330047090 Rosmarinic Acid C4H low borderline
Rcrescaffold1376350047770 Rosmarinic Acid C4H low borderline
Rcrescaffold1382620052650 Rosmarinic Acid C4H low borderline
Rcrescaffold1382640052910 Rosmarinic Acid C4H medium pass
Rcrescaffold1383460058700 Rosmarinic Acid C4H low borderline
Rcrescaffold1383460058710 Rosmarinic Acid C4H low borderline
Rcrescaffold1383530059290 Rosmarinic Acid C4H low borderline
Rcrescaffold1384600069480 Rosmarinic Acid C4H low borderline
Rcrescaffold1384670070070 Rosmarinic Acid C4H low borderline
Rcrescaffold1384820073280 Rosmarinic Acid C4H low borderline
Rcrescaffold1384890075580 Rosmarinic Acid C4H medium pass
Rcrescaffold1384900075610 Rosmarinic Acid C4H low borderline
Rcrescaffold1384900075880 Rosmarinic Acid C4H low borderline
Rcrescaffold1385410083650 Rosmarinic Acid C4H medium pass
Rcrescaffold1385520085060 Rosmarinic Acid C4H low borderline
Rcrescaffold1385980089870 Rosmarinic Acid C4H low borderline
Rcrescaffold1386050090210 Rosmarinic Acid C4H medium pass
Rcrescaffold1386070090580 Rosmarinic Acid C4H low borderline
Rcrescaffold1386720096490 Rosmarinic Acid C4H low borderline
Rcrescaffold1387390102480 Rosmarinic Acid C4H low borderline
Rcrescaffold1387400103730 Rosmarinic Acid C4H low borderline
Rcrescaffold1388030107730 Rosmarinic Acid C4H low borderline
Rcrescaffold1388050107790 Rosmarinic Acid C4H low borderline
Rcrescaffold1388270109300 Rosmarinic Acid C4H low borderline
Rcrescaffold1389780117170 Rosmarinic Acid C4H low borderline
Rcrescaffold1390090121310 Rosmarinic Acid C4H low borderline
Rcrescaffold1390090121320 Rosmarinic Acid C4H low borderline
Rcrescaffold1390090121340 Rosmarinic Acid C4H low borderline