PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1104
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Rcrescaffold69080291760 Alkaloid 7DLH medium borderline
Rcrescaffold79610300020 Alkaloid 7DLH medium borderline
Rcrescaffold126750017240 Alkaloid 8HGO medium borderline
Rcrescaffold1384360065440 Alkaloid 8HGO medium borderline
Rcrescaffold1388460110440 Alkaloid 8HGO medium borderline
Rcrescaffold1393830157630 Alkaloid 8HGO medium borderline
Rcrescaffold2190207500 Alkaloid 8HGO medium borderline
Rcrescaffold27620224780 Alkaloid 8HGO medium borderline
Rcrescaffold27620224790 Alkaloid 8HGO medium borderline
Rcrescaffold295330229920 Alkaloid 8HGO medium borderline
Rcrescaffold43180256740 Alkaloid 8HGO medium borderline
Rcrescaffold187330195690 Alkaloid ADC medium pass
Rcrescaffold45350259020 Alkaloid ADC medium pass
Rcrescaffold106160004320 Alkaloid BBE medium borderline
Rcrescaffold117290011340 Alkaloid BBE medium borderline
Rcrescaffold1292380020080 Alkaloid BBE low borderline
Rcrescaffold1349070031630 Alkaloid BBE medium borderline
Rcrescaffold1349070031640 Alkaloid BBE medium borderline
Rcrescaffold1388640111330 Alkaloid BBE medium borderline
Rcrescaffold171710187280 Alkaloid BBE medium borderline
Rcrescaffold21640205540 Alkaloid BBE medium borderline
Rcrescaffold219980208570 Alkaloid BBE medium borderline
Rcrescaffold52350267650 Alkaloid BBE medium borderline
Rcrescaffold52350267660 Alkaloid BBE medium borderline
Rcrescaffold69230292360 Alkaloid BBE medium borderline
Rcrescaffold79750300330 Alkaloid BBE medium borderline
Rcrescaffold11660010120 Alkaloid CNMT low borderline
Rcrescaffold130500023430 Alkaloid CNMT low borderline
Rcrescaffold1357560036760 Alkaloid CNMT low borderline
Rcrescaffold1382830055390 Alkaloid CNMT low borderline
Rcrescaffold1390940131190 Alkaloid CNMT low borderline
Rcrescaffold1394620165820 Alkaloid CNMT low borderline
Rcrescaffold142830176390 Alkaloid CNMT low borderline
Rcrescaffold159400183460 Alkaloid CNMT medium borderline
Rcrescaffold21220203390 Alkaloid CNMT low borderline
Rcrescaffold2480217550 Alkaloid CNMT low borderline
Rcrescaffold32070236820 Alkaloid CNMT low borderline
Rcrescaffold39770252480 Alkaloid CNMT medium borderline
Rcrescaffold9440311820 Alkaloid CNMT low borderline
Rcrescaffold107680005490 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold112360007210 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold11270008060 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold121390013670 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold1295160020720 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold1372610044760 Alkaloid CODM/T6ODM low borderline
Rcrescaffold1379820049590 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold1381770050930 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold1383280058310 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold1384440066670 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold1385270082070 Alkaloid CODM/T6ODM medium borderline