PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1104
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Rcrescaffold1385810088870 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold1385810088880 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold1388570110990 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold1388590111020 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold1388640111270 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold1389980120000 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold1390570126040 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold1391240135900 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold1391630144010 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold1392960153320 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold1394030160020 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold149260179850 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold159400183240 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold171710187090 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold18080192590 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold18760195880 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold21640205240 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold21640205390 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold269500222430 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold270020223170 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold282980226650 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold293440229400 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold318810236330 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold32070236570 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold32070237110 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold341170240400 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold351400241590 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold370740247780 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold39430251470 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold39540252320 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold49720264500 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold5360268940 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold5360268950 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold56770272090 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold56790272810 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold61350279940 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold64370284370 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold80550301810 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold80550301830 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold80550301850 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold91940310920 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold97400314400 Alkaloid CODM/T6ODM medium borderline
Rcrescaffold138550084540 Alkaloid COR medium pass
Rcrescaffold1390770129490 Alkaloid COR medium pass
Rcrescaffold1391560142220 Alkaloid COR low borderline
Rcrescaffold1391610143770 Alkaloid COR medium pass
Rcrescaffold1391850146820 Alkaloid COR low borderline
Rcrescaffold1392350150740 Alkaloid COR medium pass
Rcrescaffold1393680156060 Alkaloid COR medium pass
Rcrescaffold1393990159780 Alkaloid COR medium pass