PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1104
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Rcrescaffold281430226410 Steroid CAS medium pass
Rcrescaffold2930229320 Steroid CAS medium pass
Rcrescaffold30030231300 Steroid CAS medium pass
Rcrescaffold347900241300 Steroid CAS low borderline
Rcrescaffold61350279790 Steroid CAS medium pass
Rcrescaffold1292560020170 Steroid CPD/CYP90A1 low borderline
Rcrescaffold1339610028610 Steroid CPD/CYP90A1 low borderline
Rcrescaffold1351880033070 Steroid CPD/CYP90A1 low borderline
Rcrescaffold1358800038110 Steroid CPD/CYP90A1 medium borderline
Rcrescaffold1383460058700 Steroid CPD/CYP90A1 medium borderline
Rcrescaffold1383460058710 Steroid CPD/CYP90A1 medium borderline
Rcrescaffold1384820073270 Steroid CPD/CYP90A1 low borderline
Rcrescaffold1386040090150 Steroid CPD/CYP90A1 low borderline
Rcrescaffold1395170168570 Steroid CPD/CYP90A1 low borderline
Rcrescaffold142830176240 Steroid CPD/CYP90A1 medium borderline
Rcrescaffold285990227160 Steroid CPD/CYP90A1 medium borderline
Rcrescaffold64580285690 Steroid CPD/CYP90A1 low borderline
Rcrescaffold68020289860 Steroid CPD/CYP90A1 medium borderline
Rcrescaffold9440311760 Steroid CPD/CYP90A1 medium borderline
Rcrescaffold1392350150790 Steroid CPI1 high pass
Rcrescaffold1348330030850 Steroid CYP51G1 medium borderline
Rcrescaffold1357560036460 Steroid CYP51G1 medium borderline
Rcrescaffold1386730096570 Steroid CYP51G1 medium borderline
Rcrescaffold1387390102480 Steroid CYP51G1 medium borderline
Rcrescaffold178340191370 Steroid CYP51G1 medium borderline
Rcrescaffold26460220350 Steroid CYP51G1 medium borderline
Rcrescaffold357000242940 Steroid CYP51G1 medium borderline
Rcrescaffold49720264900 Steroid CYP51G1 medium borderline
Rcrescaffold511520266040 Steroid CYP51G1 medium borderline
Rcrescaffold511520266050 Steroid CYP51G1 medium borderline
Rcrescaffold80200301180 Steroid CYP51G1 medium borderline
Rcrescaffold83070304030 Steroid CYP51G1 medium borderline
Rcrescaffold10230001960 Steroid CYP90D1 low borderline
Rcrescaffold103730002990 Steroid CYP90D1 low borderline
Rcrescaffold1299520022470 Steroid CYP90D1 low borderline
Rcrescaffold1382620052650 Steroid CYP90D1 low borderline
Rcrescaffold1382640052910 Steroid CYP90D1 low borderline
Rcrescaffold1382980056720 Steroid CYP90D1 medium borderline
Rcrescaffold1384710071620 Steroid CYP90D1 medium borderline
Rcrescaffold1385410083650 Steroid CYP90D1 low borderline
Rcrescaffold1390110121980 Steroid CYP90D1 medium borderline
Rcrescaffold1391240135090 Steroid CYP90D1 low borderline
Rcrescaffold1391660144490 Steroid CYP90D1 medium borderline
Rcrescaffold1394570164780 Steroid CYP90D1 low borderline
Rcrescaffold148260179180 Steroid CYP90D1 low borderline
Rcrescaffold148260179190 Steroid CYP90D1 low borderline
Rcrescaffold159400182300 Steroid CYP90D1 medium borderline
Rcrescaffold208720202870 Steroid CYP90D1 low borderline
Rcrescaffold2480217400 Steroid CYP90D1 low borderline
Rcrescaffold270020222510 Steroid CYP90D1 low borderline