PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1486
Candidate Protein Records
1104
Pathway-Level Records
2825
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Rcrescaffold1357450035860 Terpenoid IDI medium pass
Rcrescaffold1383930060980 Terpenoid IDI medium pass
Rcrescaffold270020222860 Terpenoid IDI medium pass
Rcrescaffold60350278660 Terpenoid IDI low borderline
Rcrescaffold103650002820 Terpenoid MCT/IspD high pass
Rcrescaffold1383770060120 Terpenoid MCT/IspD low borderline
Rcrescaffold9440312100 Terpenoid MCT/IspD low borderline
Rcrescaffold2480217680 Terpenoid MDS/IspF high pass
Rcrescaffold1395220168800 Terpenoid MVD medium pass
Rcrescaffold1395450170560 Terpenoid MVD low borderline
Rcrescaffold434660257170 Terpenoid MVD medium pass
Rcrescaffold1385150079900 Terpenoid MVK low borderline
Rcrescaffold1391550141590 Terpenoid MVK low borderline
Rcrescaffold1391850146710 Terpenoid MVK medium pass
Rcrescaffold152270181190 Terpenoid MVK low borderline
Rcrescaffold21750206490 Terpenoid MVK medium pass
Rcrescaffold217620206990 Terpenoid MVK medium pass
Rcrescaffold217620207000 Terpenoid MVK medium pass
Rcrescaffold2930229120 Terpenoid MVK medium pass
Rcrescaffold64490285360 Terpenoid MVK low borderline
Rcrescaffold68020289850 Terpenoid MVK low borderline
Rcrescaffold69680292550 Terpenoid MVK medium pass
Rcrescaffold1391900147500 Terpenoid PMK high pass
Rcrescaffold1391900147510 Terpenoid PMK medium pass
Rcrescaffold64580285510 Terpenoid PMK low borderline
Rcrescaffold115390009180 Terpenoid TPS medium pass
Rcrescaffold115390009220 Terpenoid TPS medium pass
Rcrescaffold128720019440 Terpenoid TPS medium pass
Rcrescaffold128720019450 Terpenoid TPS medium pass
Rcrescaffold1305090023770 Terpenoid TPS medium pass
Rcrescaffold1305090023800 Terpenoid TPS medium pass
Rcrescaffold1364400040610 Terpenoid TPS medium pass
Rcrescaffold1376920048120 Terpenoid TPS medium pass
Rcrescaffold1386050090220 Terpenoid TPS medium pass
Rcrescaffold1391260135990 Terpenoid TPS medium pass
Rcrescaffold234030213840 Terpenoid TPS medium pass
Rcrescaffold347900241300 Terpenoid TPS medium pass
Rcrescaffold67120288380 Terpenoid TPS medium pass
Rcrescaffold67120288390 Terpenoid TPS medium pass
Rcrescaffold103730002980 Terpenoid UGT medium pass
Rcrescaffold126160015860 Terpenoid UGT low borderline
Rcrescaffold127490017800 Terpenoid UGT medium pass
Rcrescaffold127490017810 Terpenoid UGT medium pass
Rcrescaffold127490017820 Terpenoid UGT medium pass
Rcrescaffold1284300019050 Terpenoid UGT low borderline
Rcrescaffold1284300019070 Terpenoid UGT medium pass
Rcrescaffold1302910023040 Terpenoid UGT medium pass
Rcrescaffold131420024580 Terpenoid UGT medium pass
Rcrescaffold1327640026210 Terpenoid UGT medium pass
Rcrescaffold1353160033430 Terpenoid UGT medium pass