PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1486
Candidate Protein Records
1104
Pathway-Level Records
2825
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Rcrescaffold1355960034990 Phenylpropanoid CCR medium borderline
Rcrescaffold1376350047320 Phenylpropanoid CCR medium borderline
Rcrescaffold1384660070030 Phenylpropanoid CCR medium borderline
Rcrescaffold1385050078640 Phenylpropanoid CCR medium borderline
Rcrescaffold1386000090010 Phenylpropanoid CCR medium pass
Rcrescaffold1387400102750 Phenylpropanoid CCR medium pass
Rcrescaffold1388300109570 Phenylpropanoid CCR medium borderline
Rcrescaffold1390030120170 Phenylpropanoid CCR medium pass
Rcrescaffold1390550125640 Phenylpropanoid CCR medium borderline
Rcrescaffold1391970148370 Phenylpropanoid CCR low borderline
Rcrescaffold1392960153460 Phenylpropanoid CCR medium borderline
Rcrescaffold1394050160360 Phenylpropanoid CCR low borderline
Rcrescaffold14450177720 Phenylpropanoid CCR low borderline
Rcrescaffold183720194770 Phenylpropanoid CCR medium pass
Rcrescaffold19170197300 Phenylpropanoid CCR medium pass
Rcrescaffold192440197750 Phenylpropanoid CCR medium borderline
Rcrescaffold208720202670 Phenylpropanoid CCR low borderline
Rcrescaffold2190207170 Phenylpropanoid CCR medium borderline
Rcrescaffold27620225090 Phenylpropanoid CCR low borderline
Rcrescaffold41970255200 Phenylpropanoid CCR medium pass
Rcrescaffold1391910147750 Phenylpropanoid CCoAOMT medium pass
Rcrescaffold14350176810 Phenylpropanoid CCoAOMT low borderline
Rcrescaffold2480217910 Phenylpropanoid CCoAOMT medium pass
Rcrescaffold267300221350 Phenylpropanoid CCoAOMT low borderline
Rcrescaffold57490273630 Phenylpropanoid CCoAOMT medium pass
Rcrescaffold59560278230 Phenylpropanoid CCoAOMT medium pass
Rcrescaffold1367560042580 Phenylpropanoid COMT medium pass
Rcrescaffold1388390109920 Phenylpropanoid COMT medium pass
Rcrescaffold1394090161040 Phenylpropanoid COMT medium pass
Rcrescaffold1394700166300 Phenylpropanoid COMT medium pass
Rcrescaffold1395510171530 Phenylpropanoid COMT low borderline
Rcrescaffold180750192270 Phenylpropanoid COMT medium pass
Rcrescaffold222410209130 Phenylpropanoid COMT medium pass
Rcrescaffold222410209150 Phenylpropanoid COMT medium pass
Rcrescaffold222410209190 Phenylpropanoid COMT medium pass
Rcrescaffold222410209200 Phenylpropanoid COMT medium pass
Rcrescaffold224600210120 Phenylpropanoid COMT medium pass
Rcrescaffold533870268400 Phenylpropanoid COMT medium pass
Rcrescaffold711220293800 Phenylpropanoid COMT medium pass
Rcrescaffold11630009690 Phenylpropanoid CSE medium pass
Rcrescaffold130170022750 Phenylpropanoid CSE medium pass
Rcrescaffold1348370031410 Phenylpropanoid CSE medium pass
Rcrescaffold1355390034480 Phenylpropanoid CSE medium pass
Rcrescaffold1374450045630 Phenylpropanoid CSE medium pass
Rcrescaffold1383460058960 Phenylpropanoid CSE medium pass
Rcrescaffold1384140061440 Phenylpropanoid CSE medium pass
Rcrescaffold1384710071570 Phenylpropanoid CSE medium pass
Rcrescaffold1385290082900 Phenylpropanoid CSE low borderline
Rcrescaffold1388720112030 Phenylpropanoid CSE medium pass
Rcrescaffold1389870118390 Phenylpropanoid CSE medium pass