PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1486
Candidate Protein Records
1104
Pathway-Level Records
2825
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Rcrescaffold37190247970 Flavonoid IFS medium borderline
Rcrescaffold37320248210 Flavonoid IFS medium borderline
Rcrescaffold423640255850 Flavonoid IFS medium borderline
Rcrescaffold43160256570 Flavonoid IFS low borderline
Rcrescaffold45350259370 Flavonoid IFS low borderline
Rcrescaffold495320264050 Flavonoid IFS low borderline
Rcrescaffold49720264900 Flavonoid IFS medium borderline
Rcrescaffold533870268300 Flavonoid IFS medium borderline
Rcrescaffold533870268310 Flavonoid IFS medium borderline
Rcrescaffold533870268320 Flavonoid IFS medium borderline
Rcrescaffold55990271160 Flavonoid IFS low borderline
Rcrescaffold57490273380 Flavonoid IFS low borderline
Rcrescaffold64370284460 Flavonoid IFS low borderline
Rcrescaffold64580285690 Flavonoid IFS low borderline
Rcrescaffold68020289860 Flavonoid IFS low borderline
Rcrescaffold69080291750 Flavonoid IFS low borderline
Rcrescaffold69080291760 Flavonoid IFS low borderline
Rcrescaffold75350296450 Flavonoid IFS medium borderline
Rcrescaffold79610300020 Flavonoid IFS low borderline
Rcrescaffold83070304030 Flavonoid IFS medium borderline
Rcrescaffold87360307510 Flavonoid IFS medium borderline
Rcrescaffold89750309950 Flavonoid IFS low borderline
Rcrescaffold90320310460 Flavonoid IFS low borderline
Rcrescaffold9440311760 Flavonoid IFS low borderline
Rcrescaffold133640028180 Flavonoid PAL high pass
Rcrescaffold1373740045090 Flavonoid PAL high pass
Rcrescaffold1391300136400 Flavonoid PAL high pass
Rcrescaffold159400183720 Flavonoid PAL high pass
Rcrescaffold218320207060 Flavonoid PAL medium pass
Rcrescaffold77070298590 Flavonoid PAL high pass
Rcrescaffold103730002980 Flavonoid UFGT medium pass
Rcrescaffold105130003450 Flavonoid UFGT low borderline
Rcrescaffold126160015860 Flavonoid UFGT medium pass
Rcrescaffold127490017800 Flavonoid UFGT high pass
Rcrescaffold127490017810 Flavonoid UFGT medium pass
Rcrescaffold1284300019050 Flavonoid UFGT medium pass
Rcrescaffold1284300019070 Flavonoid UFGT medium pass
Rcrescaffold131420024580 Flavonoid UFGT medium pass
Rcrescaffold1327640026210 Flavonoid UFGT medium pass
Rcrescaffold1353160033430 Flavonoid UFGT low borderline
Rcrescaffold1367560042590 Flavonoid UFGT medium pass
Rcrescaffold1371700043790 Flavonoid UFGT medium pass
Rcrescaffold1372220043910 Flavonoid UFGT medium pass
Rcrescaffold1372220044000 Flavonoid UFGT medium pass
Rcrescaffold1372960044880 Flavonoid UFGT medium pass
Rcrescaffold1379520049030 Flavonoid UFGT high pass
Rcrescaffold1383510059140 Flavonoid UFGT medium pass
Rcrescaffold1384440066790 Flavonoid UFGT medium pass
Rcrescaffold1384490067380 Flavonoid UFGT high pass
Rcrescaffold1384490067410 Flavonoid UFGT high pass