PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3363
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BBE
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Gene Pathway Family Confidence Status
Scer01G0031870.1 Alkaloid BBE medium borderline
Scer01G0053640.1 Alkaloid BBE medium borderline
Scer01G0054000.1 Alkaloid BBE medium borderline
Scer01G0054280.1 Alkaloid BBE medium borderline
Scer02G0010320.1 Alkaloid BBE medium borderline
Scer02G0010980.1 Alkaloid BBE medium borderline
Scer02G0011000.1 Alkaloid BBE medium borderline
Scer02G0011080.1 Alkaloid BBE medium borderline
Scer02G0011180.1 Alkaloid BBE medium borderline
Scer02G0014030.1 Alkaloid BBE medium borderline
Scer02G0027450.1 Alkaloid BBE low borderline
Scer03G0014500.1 Alkaloid BBE medium borderline
Scer03G0014530.1 Alkaloid BBE medium borderline
Scer03G0014560.1 Alkaloid BBE medium borderline
Scer03G0044680.1 Alkaloid BBE medium borderline
Scer04G0012290.1 Alkaloid BBE medium borderline
Scer04G0037410.1 Alkaloid BBE medium borderline
Scer04G0043250.1 Alkaloid BBE medium borderline
Scer05G0027860.1 Alkaloid BBE medium borderline
Scer05G0029500.1 Alkaloid BBE medium borderline
Scer05G0032400.1 Alkaloid BBE medium borderline
Scer06G0021540.1 Alkaloid BBE low borderline
Scer06G0057650.1 Alkaloid BBE low borderline
Scer07G0018060.1 Alkaloid BBE medium borderline
Scer07G0035270.1 Alkaloid BBE medium borderline
Scer07G0035280.1 Alkaloid BBE medium borderline
Scer07G0035290.1 Alkaloid BBE medium borderline
Scer07G0035350.1 Alkaloid BBE medium borderline
Scer07G0035430.1 Alkaloid BBE medium borderline
Scer07G0035440.1 Alkaloid BBE medium borderline
Scer07G0038280.1 Alkaloid BBE medium borderline
Scer07G0049100.1 Alkaloid BBE medium borderline
Scer07G0049330.1 Alkaloid BBE medium borderline
Scer07G0049600.1 Alkaloid BBE medium borderline
Scer07G0049610.1 Alkaloid BBE medium borderline
Scer07G0049620.1 Alkaloid BBE medium borderline
Scer07G0049630.1 Alkaloid BBE medium borderline
Scer07G0049660.1 Alkaloid BBE medium borderline
Scer07G0053890.1 Alkaloid BBE medium borderline
ScerGWHASIY000000080005630.1 Alkaloid BBE medium borderline