PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3363
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CCR
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Gene Pathway Family Confidence Status
Scer01G0000390.1 Phenylpropanoid CCR medium borderline
Scer01G0026930.1 Phenylpropanoid CCR medium borderline
Scer01G0053630.1 Phenylpropanoid CCR medium pass
Scer02G0002370.1 Phenylpropanoid CCR medium borderline
Scer02G0002380.1 Phenylpropanoid CCR medium borderline
Scer02G0002390.1 Phenylpropanoid CCR medium borderline
Scer02G0043380.1 Phenylpropanoid CCR medium borderline
Scer02G0051490.1 Phenylpropanoid CCR medium borderline
Scer03G0004260.1 Phenylpropanoid CCR medium borderline
Scer03G0030130.1 Phenylpropanoid CCR medium borderline
Scer03G0030230.1 Phenylpropanoid CCR medium pass
Scer04G0022810.1 Phenylpropanoid CCR medium pass
Scer04G0035090.1 Phenylpropanoid CCR medium pass
Scer04G0035290.1 Phenylpropanoid CCR medium borderline
Scer04G0035300.1 Phenylpropanoid CCR medium borderline
Scer04G0038760.1 Phenylpropanoid CCR medium borderline
Scer04G0046590.1 Phenylpropanoid CCR medium borderline
Scer05G0005570.1 Phenylpropanoid CCR medium borderline
Scer05G0005610.1 Phenylpropanoid CCR medium borderline
Scer05G0005620.1 Phenylpropanoid CCR medium borderline
Scer05G0005810.1 Phenylpropanoid CCR medium borderline
Scer05G0006440.1 Phenylpropanoid CCR medium borderline
Scer05G0011850.1 Phenylpropanoid CCR medium pass
Scer05G0012150.1 Phenylpropanoid CCR medium borderline
Scer05G0016570.1 Phenylpropanoid CCR medium borderline
Scer05G0023360.1 Phenylpropanoid CCR medium borderline
Scer05G0023370.1 Phenylpropanoid CCR medium borderline
Scer05G0028510.1 Phenylpropanoid CCR medium borderline
Scer05G0028650.1 Phenylpropanoid CCR medium borderline
Scer05G0028660.1 Phenylpropanoid CCR medium borderline
Scer05G0028670.1 Phenylpropanoid CCR medium borderline
Scer05G0028680.1 Phenylpropanoid CCR medium borderline
Scer05G0028690.1 Phenylpropanoid CCR medium borderline
Scer05G0028710.1 Phenylpropanoid CCR medium borderline
Scer05G0028720.1 Phenylpropanoid CCR medium borderline
Scer05G0045570.1 Phenylpropanoid CCR medium borderline
Scer05G0045630.1 Phenylpropanoid CCR low borderline
Scer05G0050430.1 Phenylpropanoid CCR low borderline
Scer05G0066670.1 Phenylpropanoid CCR medium borderline
Scer05G0066680.1 Phenylpropanoid CCR medium pass
Scer06G0007330.1 Phenylpropanoid CCR medium borderline
Scer06G0034400.1 Phenylpropanoid CCR medium borderline
Scer06G0034410.1 Phenylpropanoid CCR medium borderline
Scer06G0034440.1 Phenylpropanoid CCR medium borderline
Scer06G0034450.1 Phenylpropanoid CCR medium borderline
Scer06G0034460.1 Phenylpropanoid CCR medium borderline
Scer06G0037070.1 Phenylpropanoid CCR low borderline
Scer06G0046770.1 Phenylpropanoid CCR medium borderline
Scer06G0046810.1 Phenylpropanoid CCR medium borderline
Scer07G0030830.1 Phenylpropanoid CCR medium borderline