PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3363
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
Scer01G0004760.1 Alkaloid G8O/G8H medium borderline
Scer01G0005180.1 Alkaloid G8O/G8H medium borderline
Scer01G0038190.1 Alkaloid G8O/G8H medium borderline
Scer01G0046290.1 Alkaloid G8O/G8H medium borderline
Scer01G0053480.1 Alkaloid G8O/G8H medium borderline
Scer02G0000140.1 Alkaloid G8O/G8H low borderline
Scer02G0000200.1 Alkaloid G8O/G8H medium borderline
Scer02G0009590.1 Alkaloid G8O/G8H medium borderline
Scer02G0033280.1 Alkaloid G8O/G8H medium borderline
Scer02G0043170.1 Alkaloid G8O/G8H medium borderline
Scer02G0047690.1 Alkaloid G8O/G8H medium borderline
Scer02G0057120.1 Alkaloid G8O/G8H medium borderline
Scer02G0062590.1 Alkaloid G8O/G8H medium borderline
Scer03G0005750.1 Alkaloid G8O/G8H medium borderline
Scer03G0005760.1 Alkaloid G8O/G8H medium borderline
Scer03G0005780.1 Alkaloid G8O/G8H medium borderline
Scer03G0014510.1 Alkaloid G8O/G8H medium borderline
Scer03G0040870.1 Alkaloid G8O/G8H medium borderline
Scer03G0053120.1 Alkaloid G8O/G8H medium borderline
Scer04G0030400.1 Alkaloid G8O/G8H medium borderline
Scer04G0034270.1 Alkaloid G8O/G8H medium borderline
Scer04G0046800.1 Alkaloid G8O/G8H medium pass
Scer04G0055550.1 Alkaloid G8O/G8H medium borderline
Scer04G0059980.1 Alkaloid G8O/G8H medium borderline
Scer04G0060300.1 Alkaloid G8O/G8H medium borderline
Scer05G0007110.1 Alkaloid G8O/G8H medium borderline
Scer05G0007120.1 Alkaloid G8O/G8H medium borderline
Scer05G0033970.1 Alkaloid G8O/G8H medium borderline
Scer05G0043090.1 Alkaloid G8O/G8H medium borderline
Scer05G0043280.1 Alkaloid G8O/G8H medium borderline
Scer05G0047290.1 Alkaloid G8O/G8H medium borderline
Scer05G0051100.1 Alkaloid G8O/G8H medium borderline
Scer05G0052470.1 Alkaloid G8O/G8H medium borderline
Scer05G0054010.1 Alkaloid G8O/G8H medium borderline
Scer05G0062780.1 Alkaloid G8O/G8H medium borderline
Scer05G0064190.1 Alkaloid G8O/G8H medium borderline
Scer06G0001850.1 Alkaloid G8O/G8H medium borderline
Scer06G0011080.1 Alkaloid G8O/G8H medium borderline
Scer06G0018490.1 Alkaloid G8O/G8H medium borderline
Scer06G0046420.1 Alkaloid G8O/G8H medium borderline
Scer06G0046460.1 Alkaloid G8O/G8H medium borderline
Scer06G0046470.1 Alkaloid G8O/G8H medium borderline
Scer06G0046480.1 Alkaloid G8O/G8H medium borderline
Scer07G0005030.1 Alkaloid G8O/G8H medium borderline
Scer07G0007980.1 Alkaloid G8O/G8H medium borderline
Scer07G0024040.1 Alkaloid G8O/G8H medium borderline
Scer07G0025550.1 Alkaloid G8O/G8H medium borderline
Scer07G0028180.1 Alkaloid G8O/G8H medium borderline
Scer07G0031950.1 Alkaloid G8O/G8H medium borderline
Scer07G0034580.1 Alkaloid G8O/G8H medium borderline