PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3363
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPD/CYP90A1
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Gene Pathway Family Confidence Status
Scer01G0027110.1 Steroid CPD/CYP90A1 medium borderline
Scer01G0027120.1 Steroid CPD/CYP90A1 medium borderline
Scer01G0033500.1 Steroid CPD/CYP90A1 medium borderline
Scer01G0033540.1 Steroid CPD/CYP90A1 medium borderline
Scer01G0044500.1 Steroid CPD/CYP90A1 medium borderline
Scer01G0046800.1 Steroid CPD/CYP90A1 low borderline
Scer02G0014530.1 Steroid CPD/CYP90A1 medium borderline
Scer02G0014560.1 Steroid CPD/CYP90A1 medium borderline
Scer02G0057010.1 Steroid CPD/CYP90A1 medium borderline
Scer02G0057120.1 Steroid CPD/CYP90A1 medium borderline
Scer02G0060150.1 Steroid CPD/CYP90A1 low borderline
Scer02G0063840.1 Steroid CPD/CYP90A1 low borderline
Scer02G0065520.1 Steroid CPD/CYP90A1 medium borderline
Scer03G0014660.1 Steroid CPD/CYP90A1 low borderline
Scer03G0014670.1 Steroid CPD/CYP90A1 low borderline
Scer03G0014680.1 Steroid CPD/CYP90A1 low borderline
Scer03G0019370.1 Steroid CPD/CYP90A1 medium borderline
Scer03G0019380.1 Steroid CPD/CYP90A1 medium borderline
Scer03G0040010.1 Steroid CPD/CYP90A1 low borderline
Scer04G0008440.1 Steroid CPD/CYP90A1 low borderline
Scer04G0049660.1 Steroid CPD/CYP90A1 low borderline
Scer05G0003250.1 Steroid CPD/CYP90A1 medium borderline
Scer05G0018330.1 Steroid CPD/CYP90A1 medium borderline
Scer05G0024650.1 Steroid CPD/CYP90A1 medium borderline
Scer06G0051600.1 Steroid CPD/CYP90A1 low borderline
Scer07G0011060.1 Steroid CPD/CYP90A1 medium borderline
Scer07G0016340.1 Steroid CPD/CYP90A1 low borderline
Scer07G0016350.1 Steroid CPD/CYP90A1 low borderline
Scer07G0024530.1 Steroid CPD/CYP90A1 low borderline
Scer07G0026610.1 Steroid CPD/CYP90A1 low borderline
ScerGWHASIY000000080005880.1 Steroid CPD/CYP90A1 medium borderline
ScerGWHASIY000000080015270.1 Steroid CPD/CYP90A1 medium borderline
ScerGWHASIY000000080016900.1 Steroid CPD/CYP90A1 medium borderline