PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3363
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX1/CYP85A1
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Gene Pathway Family Confidence Status
Scer01G0005670.1 Steroid BR6OX1/CYP85A1 low borderline
Scer01G0017050.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer01G0021770.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer01G0021960.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer01G0021990.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer01G0022000.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer01G0024470.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer01G0024520.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer02G0064210.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer03G0006550.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer03G0006590.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer03G0006700.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer03G0054540.1 Steroid BR6OX1/CYP85A1 low borderline
Scer04G0005830.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer04G0007210.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer04G0038860.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer04G0050330.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer04G0061360.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer04G0061400.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer04G0061490.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer05G0000350.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer05G0023730.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer05G0026310.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer05G0039400.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer05G0051100.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer06G0022230.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer07G0031950.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer07G0054670.1 Steroid BR6OX1/CYP85A1 medium borderline
Scer07G0054750.1 Steroid BR6OX1/CYP85A1 medium borderline
ScerGWHASIY000000080001460.1 Steroid BR6OX1/CYP85A1 medium borderline
ScerGWHASIY000000080003600.1 Steroid BR6OX1/CYP85A1 low borderline
ScerGWHASIY000000080009200.1 Steroid BR6OX1/CYP85A1 medium borderline