PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3363
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Gene Pathway Family Confidence Status
Scer01G0004130.1 Phenylpropanoid CAD low borderline
Scer01G0004740.1 Phenylpropanoid CAD low borderline
Scer01G0004750.1 Phenylpropanoid CAD low borderline
Scer01G0005450.1 Phenylpropanoid CAD low borderline
Scer01G0024180.1 Phenylpropanoid CAD medium borderline
Scer01G0024210.1 Phenylpropanoid CAD medium borderline
Scer01G0046390.1 Phenylpropanoid CAD low borderline
Scer02G0001480.1 Phenylpropanoid CAD medium pass
Scer02G0001860.1 Phenylpropanoid CAD medium pass
Scer02G0001870.1 Phenylpropanoid CAD medium pass
Scer02G0012450.1 Phenylpropanoid CAD low borderline
Scer02G0012570.1 Phenylpropanoid CAD low borderline
Scer02G0012600.1 Phenylpropanoid CAD low borderline
Scer02G0019730.1 Phenylpropanoid CAD medium borderline
Scer02G0019740.1 Phenylpropanoid CAD medium borderline
Scer02G0028980.1 Phenylpropanoid CAD low borderline
Scer02G0033510.1 Phenylpropanoid CAD low borderline
Scer02G0033680.1 Phenylpropanoid CAD low borderline
Scer02G0045430.1 Phenylpropanoid CAD medium borderline
Scer02G0045440.1 Phenylpropanoid CAD medium borderline
Scer02G0047910.1 Phenylpropanoid CAD medium pass
Scer02G0047980.1 Phenylpropanoid CAD low borderline
Scer02G0048160.1 Phenylpropanoid CAD low borderline
Scer02G0048170.1 Phenylpropanoid CAD low borderline
Scer02G0048180.1 Phenylpropanoid CAD low borderline
Scer02G0048220.1 Phenylpropanoid CAD low borderline
Scer02G0048260.1 Phenylpropanoid CAD low borderline
Scer02G0051800.1 Phenylpropanoid CAD medium borderline
Scer02G0051810.1 Phenylpropanoid CAD medium borderline
Scer02G0051830.1 Phenylpropanoid CAD medium borderline
Scer02G0051850.1 Phenylpropanoid CAD medium borderline
Scer02G0051880.1 Phenylpropanoid CAD medium borderline
Scer02G0051900.1 Phenylpropanoid CAD medium borderline
Scer02G0052100.1 Phenylpropanoid CAD medium borderline
Scer02G0052110.1 Phenylpropanoid CAD medium borderline
Scer02G0052120.1 Phenylpropanoid CAD medium borderline
Scer02G0063610.1 Phenylpropanoid CAD medium borderline
Scer02G0064250.1 Phenylpropanoid CAD medium borderline
Scer03G0002300.1 Phenylpropanoid CAD low borderline
Scer03G0008810.1 Phenylpropanoid CAD low borderline
Scer03G0008840.1 Phenylpropanoid CAD low borderline
Scer03G0008860.1 Phenylpropanoid CAD low borderline
Scer03G0008870.1 Phenylpropanoid CAD low borderline
Scer03G0008880.1 Phenylpropanoid CAD low borderline
Scer03G0010150.1 Phenylpropanoid CAD medium borderline
Scer03G0050450.1 Phenylpropanoid CAD medium pass
Scer03G0050480.1 Phenylpropanoid CAD medium pass
Scer03G0051540.1 Phenylpropanoid CAD medium pass
Scer04G0012010.1 Phenylpropanoid CAD low borderline
Scer04G0012050.1 Phenylpropanoid CAD low borderline