PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3363
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FNS
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Gene Pathway Family Confidence Status
Scer01G0000020.1 Flavonoid FNS medium borderline
Scer01G0000990.1 Flavonoid FNS medium borderline
Scer01G0001270.1 Flavonoid FNS medium borderline
Scer01G0034180.1 Flavonoid FNS medium borderline
Scer01G0046290.1 Flavonoid FNS medium pass
Scer02G0001940.1 Flavonoid FNS medium borderline
Scer02G0033280.1 Flavonoid FNS medium borderline
Scer02G0047690.1 Flavonoid FNS medium borderline
Scer03G0025890.1 Flavonoid FNS medium borderline
Scer03G0025900.1 Flavonoid FNS medium borderline
Scer03G0026970.1 Flavonoid FNS low borderline
Scer04G0000680.1 Flavonoid FNS medium borderline
Scer04G0015160.1 Flavonoid FNS medium borderline
Scer04G0034610.1 Flavonoid FNS medium borderline
Scer04G0044360.1 Flavonoid FNS medium borderline
Scer04G0047980.1 Flavonoid FNS medium borderline
Scer04G0057480.1 Flavonoid FNS medium borderline
Scer04G0061360.1 Flavonoid FNS medium borderline
Scer04G0061400.1 Flavonoid FNS low borderline
Scer04G0061490.1 Flavonoid FNS low borderline
Scer05G0018200.1 Flavonoid FNS medium borderline
Scer05G0018610.1 Flavonoid FNS medium borderline
Scer05G0019610.1 Flavonoid FNS low borderline
Scer05G0026310.1 Flavonoid FNS medium borderline
Scer05G0031160.1 Flavonoid FNS medium borderline
Scer05G0056700.1 Flavonoid FNS medium borderline
Scer05G0063950.1 Flavonoid FNS medium borderline
Scer06G0008190.1 Flavonoid FNS medium borderline
Scer06G0011360.1 Flavonoid FNS medium borderline
Scer07G0007980.1 Flavonoid FNS medium borderline
Scer07G0008880.1 Flavonoid FNS medium borderline
Scer07G0031950.1 Flavonoid FNS medium borderline
Scer07G0034580.1 Flavonoid FNS medium borderline
Scer07G0041190.1 Flavonoid FNS medium borderline
Scer07G0050430.1 Flavonoid FNS medium borderline
Scer07G0050890.1 Flavonoid FNS low borderline
Scer07G0050900.1 Flavonoid FNS low borderline
Scer07G0053660.1 Flavonoid FNS medium borderline
Scer07G0054020.1 Flavonoid FNS medium borderline
Scer07G0054050.1 Flavonoid FNS medium borderline
Scer07G0055710.1 Flavonoid FNS medium borderline