PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3363
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
Scer03G0009110.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0009220.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0009230.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0009240.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0009310.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0009320.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0009330.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0009980.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0010060.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0010070.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0010120.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0011080.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0011100.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0011110.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0011610.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0011620.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0012120.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0014760.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0028230.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0029720.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0039970.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0039990.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0040880.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0041010.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0044250.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0049460.1 Steroid BR6OX2/CYP85A2 low borderline
Scer03G0054530.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0003930.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0004010.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0024600.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0034610.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0038100.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0039030.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0039760.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0039820.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0039840.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0039990.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0041070.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0041670.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0044380.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0045530.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0045550.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0046410.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0046990.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0047030.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0047040.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0047070.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0047080.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0047290.1 Steroid BR6OX2/CYP85A2 low borderline
Scer04G0047700.1 Steroid BR6OX2/CYP85A2 low borderline