PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3363
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
Scer03G0005630.1 Steroid DWF4/CYP90B1 low borderline
Scer03G0005760.1 Steroid DWF4/CYP90B1 low borderline
Scer03G0005780.1 Steroid DWF4/CYP90B1 low borderline
Scer03G0014510.1 Steroid DWF4/CYP90B1 low borderline
Scer03G0016000.1 Steroid DWF4/CYP90B1 low borderline
Scer03G0018940.1 Steroid DWF4/CYP90B1 low borderline
Scer03G0019590.1 Steroid DWF4/CYP90B1 low borderline
Scer03G0029420.1 Steroid DWF4/CYP90B1 low borderline
Scer03G0029430.1 Steroid DWF4/CYP90B1 low borderline
Scer03G0029440.1 Steroid DWF4/CYP90B1 low borderline
Scer03G0029630.1 Steroid DWF4/CYP90B1 low borderline
Scer03G0040000.1 Steroid DWF4/CYP90B1 low borderline
Scer03G0040870.1 Steroid DWF4/CYP90B1 low borderline
Scer03G0044330.1 Steroid DWF4/CYP90B1 low borderline
Scer03G0044710.1 Steroid DWF4/CYP90B1 medium borderline
Scer03G0045130.1 Steroid DWF4/CYP90B1 medium borderline
Scer04G0000670.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0002140.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0003790.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0012640.1 Steroid DWF4/CYP90B1 medium borderline
Scer04G0015180.1 Steroid DWF4/CYP90B1 medium borderline
Scer04G0016170.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0028590.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0034660.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0034670.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0034700.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0036330.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0036340.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0036750.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0036760.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0040730.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0041000.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0041020.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0041090.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0042270.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0042960.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0042970.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0044370.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0045510.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0046530.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0047160.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0047240.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0047280.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0052570.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0053220.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0057210.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0059100.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0059120.1 Steroid DWF4/CYP90B1 low borderline
Scer04G0059150.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0003230.1 Steroid DWF4/CYP90B1 medium borderline