PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3363
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
Scer05G0003340.1 Steroid DWF4/CYP90B1 medium borderline
Scer05G0005400.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0007110.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0007120.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0007130.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0007140.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0013170.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0013710.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0014620.1 Steroid DWF4/CYP90B1 medium borderline
Scer05G0020820.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0026270.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0034080.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0034090.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0034120.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0034800.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0035120.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0035130.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0038500.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0042460.1 Steroid DWF4/CYP90B1 medium borderline
Scer05G0042820.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0043070.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0043080.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0043090.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0043100.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0043280.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0043700.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0045580.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0047290.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0055780.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0059580.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0059590.1 Steroid DWF4/CYP90B1 low borderline
Scer05G0063380.1 Steroid DWF4/CYP90B1 medium borderline
Scer06G0000460.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0000570.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0001700.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0005000.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0008190.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0009920.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0009930.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0009990.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0010000.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0014280.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0021190.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0024940.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0032870.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0032910.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0032980.1 Steroid DWF4/CYP90B1 medium borderline
Scer06G0033480.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0034160.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0035730.1 Steroid DWF4/CYP90B1 low borderline