PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3363
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
Scer06G0035740.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0035760.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0035770.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0037120.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0040270.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0040290.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0043340.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0043620.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0043740.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0043760.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0043910.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0045650.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0046980.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0048050.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0048130.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0054680.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0055240.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0057900.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0057930.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0059000.1 Steroid DWF4/CYP90B1 low borderline
Scer06G0059020.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0003580.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0004240.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0004810.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0006770.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0007590.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0008080.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0011760.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0016880.1 Steroid DWF4/CYP90B1 medium borderline
Scer07G0020250.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0021200.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0024040.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0024310.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0026860.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0028180.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0029970.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0033460.1 Steroid DWF4/CYP90B1 medium borderline
Scer07G0034580.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0034760.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0034780.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0040680.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0042500.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0044950.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0046630.1 Steroid DWF4/CYP90B1 medium borderline
Scer07G0046800.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0051280.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0051310.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0052410.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0052690.1 Steroid DWF4/CYP90B1 low borderline
Scer07G0053630.1 Steroid DWF4/CYP90B1 low borderline