PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3363
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status Best Target
Scer03G0004720.1 Phenylpropanoid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
Scer03G0021690.1 Phenylpropanoid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
Scer06G0015400.1 Phenylpropanoid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
Scer06G0015420.1 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scer06G0015430.1 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
ScerGWHASIY000000080007830.1 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scer01G0003840.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scer01G0003850.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scer01G0003860.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scer01G0003870.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scer01G0003880.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scer01G0003890.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scer01G0003900.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scer01G0003930.1 Rosmarinic Acid PAL medium pass PAL__00003__sp_P45724_PAL2_ARATH
Scer01G0012380.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scer01G0012390.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scer01G0012630.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scer01G0037060.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scer01G0051820.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scer01G0051830.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scer01G0051840.1 Rosmarinic Acid PAL medium pass PAL__00003__sp_P45724_PAL2_ARATH
Scer02G0019700.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scer02G0019770.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scer02G0021630.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scer02G0041970.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scer02G0041980.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scer02G0041990.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scer03G0001430.1 Rosmarinic Acid PAL medium pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
Scer03G0004720.1 Rosmarinic Acid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
Scer03G0021690.1 Rosmarinic Acid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
Scer06G0015400.1 Rosmarinic Acid PAL high pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
Scer06G0015420.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Scer06G0015430.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
ScerGWHASIY000000080007830.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR