PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3363
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
Reset
Gene Pathway Family Confidence Status
Scer02G0005320.1 Alkaloid T3O medium borderline
Scer02G0005330.1 Alkaloid T3O medium borderline
Scer02G0005570.1 Alkaloid T3O low borderline
Scer02G0013330.1 Alkaloid T3O medium borderline
Scer02G0026970.1 Alkaloid T3O medium borderline
Scer02G0031550.1 Alkaloid T3O medium borderline
Scer02G0036580.1 Alkaloid T3O medium borderline
Scer02G0037620.1 Alkaloid T3O medium borderline
Scer02G0041630.1 Alkaloid T3O medium pass
Scer02G0044400.1 Alkaloid T3O low borderline
Scer02G0045810.1 Alkaloid T3O medium pass
Scer02G0046300.1 Alkaloid T3O low borderline
Scer02G0047990.1 Alkaloid T3O medium borderline
Scer02G0048130.1 Alkaloid T3O medium borderline
Scer02G0048150.1 Alkaloid T3O medium borderline
Scer02G0048770.1 Alkaloid T3O medium borderline
Scer02G0049390.1 Alkaloid T3O medium borderline
Scer02G0050530.1 Alkaloid T3O medium borderline
Scer02G0050760.1 Alkaloid T3O medium borderline
Scer02G0055830.1 Alkaloid T3O medium borderline
Scer02G0055850.1 Alkaloid T3O medium borderline
Scer02G0057010.1 Alkaloid T3O medium pass
Scer02G0057080.1 Alkaloid T3O medium borderline
Scer02G0057180.1 Alkaloid T3O medium borderline
Scer02G0058970.1 Alkaloid T3O medium borderline
Scer02G0059030.1 Alkaloid T3O medium borderline
Scer02G0059070.1 Alkaloid T3O medium borderline
Scer02G0060430.1 Alkaloid T3O medium borderline
Scer02G0061310.1 Alkaloid T3O medium borderline
Scer02G0061320.1 Alkaloid T3O medium borderline
Scer02G0061540.1 Alkaloid T3O medium borderline
Scer02G0063640.1 Alkaloid T3O medium borderline
Scer02G0065520.1 Alkaloid T3O low borderline
Scer03G0000050.1 Alkaloid T3O medium borderline
Scer03G0000060.1 Alkaloid T3O medium borderline
Scer03G0005630.1 Alkaloid T3O medium pass
Scer03G0006550.1 Alkaloid T3O medium borderline
Scer03G0006590.1 Alkaloid T3O medium borderline
Scer03G0006600.1 Alkaloid T3O medium borderline
Scer03G0006700.1 Alkaloid T3O medium borderline
Scer03G0008820.1 Alkaloid T3O medium borderline
Scer03G0008910.1 Alkaloid T3O medium borderline
Scer03G0009330.1 Alkaloid T3O medium borderline
Scer03G0009980.1 Alkaloid T3O medium borderline
Scer03G0010060.1 Alkaloid T3O medium borderline
Scer03G0010070.1 Alkaloid T3O medium borderline
Scer03G0011080.1 Alkaloid T3O medium borderline
Scer03G0011100.1 Alkaloid T3O medium borderline
Scer03G0011110.1 Alkaloid T3O medium borderline
Scer03G0011120.1 Alkaloid T3O medium borderline