PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3363
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Scer01G0020290.1 Terpenoid AACT medium borderline
Scer02G0011810.1 Terpenoid AACT low borderline
Scer02G0011820.1 Terpenoid AACT low borderline
Scer02G0033580.1 Terpenoid AACT low borderline
Scer03G0002560.1 Terpenoid AACT medium borderline
Scer05G0017110.1 Terpenoid AACT medium borderline
Scer06G0034130.1 Terpenoid AACT medium borderline
Scer06G0034180.1 Terpenoid AACT medium borderline
Scer07G0052000.1 Terpenoid AACT medium borderline
Scer01G0000120.1 Terpenoid BAHD medium pass
Scer01G0000560.1 Terpenoid BAHD medium pass
Scer01G0000580.1 Terpenoid BAHD medium pass
Scer01G0000600.1 Terpenoid BAHD medium pass
Scer01G0000780.1 Terpenoid BAHD medium pass
Scer01G0001500.1 Terpenoid BAHD medium pass
Scer01G0002490.1 Terpenoid BAHD medium pass
Scer01G0002960.1 Terpenoid BAHD medium pass
Scer01G0005510.1 Terpenoid BAHD medium pass
Scer01G0008570.1 Terpenoid BAHD medium pass
Scer01G0009410.1 Terpenoid BAHD medium pass
Scer01G0010070.1 Terpenoid BAHD medium pass
Scer01G0010100.1 Terpenoid BAHD low borderline
Scer01G0010350.1 Terpenoid BAHD medium pass
Scer01G0010470.1 Terpenoid BAHD low borderline
Scer01G0010870.1 Terpenoid BAHD low borderline
Scer01G0010880.1 Terpenoid BAHD low borderline
Scer01G0010890.1 Terpenoid BAHD low borderline
Scer01G0010910.1 Terpenoid BAHD low borderline
Scer01G0013150.1 Terpenoid BAHD low borderline
Scer01G0015350.1 Terpenoid BAHD medium pass
Scer01G0016410.1 Terpenoid BAHD medium pass
Scer01G0017250.1 Terpenoid BAHD medium pass
Scer01G0019680.1 Terpenoid BAHD low borderline
Scer01G0019720.1 Terpenoid BAHD low borderline
Scer01G0019870.1 Terpenoid BAHD medium pass
Scer01G0021540.1 Terpenoid BAHD medium pass
Scer01G0021550.1 Terpenoid BAHD medium pass
Scer01G0024190.1 Terpenoid BAHD medium pass
Scer01G0024230.1 Terpenoid BAHD medium pass
Scer01G0024970.1 Terpenoid BAHD medium pass
Scer01G0024990.1 Terpenoid BAHD low borderline
Scer01G0025470.1 Terpenoid BAHD medium pass
Scer01G0027050.1 Terpenoid BAHD medium pass
Scer01G0031070.1 Terpenoid BAHD medium pass
Scer01G0035810.1 Terpenoid BAHD medium pass
Scer01G0036490.1 Terpenoid BAHD medium pass
Scer01G0036500.1 Terpenoid BAHD medium pass
Scer01G0036890.1 Terpenoid BAHD medium pass
Scer01G0036900.1 Terpenoid BAHD medium pass
Scer01G0037000.1 Terpenoid BAHD low borderline