PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3598
Candidate Protein Records
3363
Pathway-Level Records
8560
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Scer06G0013620.1 Rosmarinic Acid C4H low borderline
Scer06G0014280.1 Rosmarinic Acid C4H low borderline
Scer06G0018490.1 Rosmarinic Acid C4H low borderline
Scer06G0020000.1 Rosmarinic Acid C4H medium pass
Scer06G0022230.1 Rosmarinic Acid C4H low borderline
Scer06G0022280.1 Rosmarinic Acid C4H medium pass
Scer06G0025810.1 Rosmarinic Acid C4H low borderline
Scer06G0032870.1 Rosmarinic Acid C4H low borderline
Scer06G0032910.1 Rosmarinic Acid C4H low borderline
Scer06G0033480.1 Rosmarinic Acid C4H low borderline
Scer06G0035730.1 Rosmarinic Acid C4H low borderline
Scer06G0035740.1 Rosmarinic Acid C4H low borderline
Scer06G0035760.1 Rosmarinic Acid C4H low borderline
Scer06G0035770.1 Rosmarinic Acid C4H low borderline
Scer06G0036690.1 Rosmarinic Acid C4H low borderline
Scer06G0042580.1 Rosmarinic Acid C4H medium pass
Scer06G0042590.1 Rosmarinic Acid C4H medium pass
Scer06G0043340.1 Rosmarinic Acid C4H low borderline
Scer06G0043620.1 Rosmarinic Acid C4H low borderline
Scer06G0043660.1 Rosmarinic Acid C4H low borderline
Scer06G0043910.1 Rosmarinic Acid C4H medium pass
Scer06G0045650.1 Rosmarinic Acid C4H medium pass
Scer06G0045660.1 Rosmarinic Acid C4H medium pass
Scer06G0046000.1 Rosmarinic Acid C4H low borderline
Scer06G0046420.1 Rosmarinic Acid C4H low borderline
Scer06G0046460.1 Rosmarinic Acid C4H low borderline
Scer06G0046470.1 Rosmarinic Acid C4H low borderline
Scer06G0046480.1 Rosmarinic Acid C4H low borderline
Scer06G0046980.1 Rosmarinic Acid C4H low borderline
Scer06G0047710.1 Rosmarinic Acid C4H low borderline
Scer06G0047720.1 Rosmarinic Acid C4H low borderline
Scer06G0047730.1 Rosmarinic Acid C4H low borderline
Scer06G0047740.1 Rosmarinic Acid C4H low borderline
Scer06G0048050.1 Rosmarinic Acid C4H low borderline
Scer06G0048130.1 Rosmarinic Acid C4H low borderline
Scer06G0048570.1 Rosmarinic Acid C4H medium pass
Scer06G0050080.1 Rosmarinic Acid C4H medium pass
Scer06G0052370.1 Rosmarinic Acid C4H medium pass
Scer06G0053140.1 Rosmarinic Acid C4H low borderline
Scer06G0055020.1 Rosmarinic Acid C4H medium pass
Scer06G0055050.1 Rosmarinic Acid C4H medium pass
Scer06G0055240.1 Rosmarinic Acid C4H medium pass
Scer06G0055800.1 Rosmarinic Acid C4H medium pass
Scer06G0056310.1 Rosmarinic Acid C4H medium pass
Scer06G0056350.1 Rosmarinic Acid C4H medium pass
Scer06G0056820.1 Rosmarinic Acid C4H low borderline
Scer06G0057900.1 Rosmarinic Acid C4H low borderline
Scer06G0057920.1 Rosmarinic Acid C4H low borderline
Scer06G0057930.1 Rosmarinic Acid C4H medium pass
Scer06G0057980.1 Rosmarinic Acid C4H low borderline