PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3598
Candidate Protein Records
3363
Pathway-Level Records
8560
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Scer02G0014030.1 Alkaloid BBE medium borderline
Scer02G0027450.1 Alkaloid BBE low borderline
Scer03G0014500.1 Alkaloid BBE medium borderline
Scer03G0014530.1 Alkaloid BBE medium borderline
Scer03G0014560.1 Alkaloid BBE medium borderline
Scer03G0044680.1 Alkaloid BBE medium borderline
Scer04G0012290.1 Alkaloid BBE medium borderline
Scer04G0037410.1 Alkaloid BBE medium borderline
Scer04G0043250.1 Alkaloid BBE medium borderline
Scer05G0027860.1 Alkaloid BBE medium borderline
Scer05G0029500.1 Alkaloid BBE medium borderline
Scer05G0032400.1 Alkaloid BBE medium borderline
Scer06G0021540.1 Alkaloid BBE low borderline
Scer06G0057650.1 Alkaloid BBE low borderline
Scer07G0018060.1 Alkaloid BBE medium borderline
Scer07G0035270.1 Alkaloid BBE medium borderline
Scer07G0035280.1 Alkaloid BBE medium borderline
Scer07G0035290.1 Alkaloid BBE medium borderline
Scer07G0035350.1 Alkaloid BBE medium borderline
Scer07G0035430.1 Alkaloid BBE medium borderline
Scer07G0035440.1 Alkaloid BBE medium borderline
Scer07G0038280.1 Alkaloid BBE medium borderline
Scer07G0049100.1 Alkaloid BBE medium borderline
Scer07G0049330.1 Alkaloid BBE medium borderline
Scer07G0049600.1 Alkaloid BBE medium borderline
Scer07G0049610.1 Alkaloid BBE medium borderline
Scer07G0049620.1 Alkaloid BBE medium borderline
Scer07G0049630.1 Alkaloid BBE medium borderline
Scer07G0049660.1 Alkaloid BBE medium borderline
Scer07G0053890.1 Alkaloid BBE medium borderline
ScerGWHASIY000000080005630.1 Alkaloid BBE medium borderline
Scer01G0025180.1 Alkaloid CNMT low borderline
Scer01G0025460.1 Alkaloid CNMT low borderline
Scer02G0009870.1 Alkaloid CNMT medium pass
Scer02G0016770.1 Alkaloid CNMT low borderline
Scer02G0037250.1 Alkaloid CNMT medium pass
Scer02G0050410.1 Alkaloid CNMT low borderline
Scer03G0003110.1 Alkaloid CNMT low borderline
Scer04G0002330.1 Alkaloid CNMT low borderline
Scer04G0002470.1 Alkaloid CNMT low borderline
Scer04G0028400.1 Alkaloid CNMT low borderline
Scer04G0037900.1 Alkaloid CNMT low borderline
Scer04G0039140.1 Alkaloid CNMT low borderline
Scer04G0045080.1 Alkaloid CNMT low borderline
Scer05G0002360.1 Alkaloid CNMT low borderline
Scer05G0011500.1 Alkaloid CNMT low borderline
Scer05G0059060.1 Alkaloid CNMT low borderline
Scer06G0017080.1 Alkaloid CNMT low borderline
Scer06G0024670.1 Alkaloid CNMT low borderline
Scer07G0006220.1 Alkaloid CNMT low borderline