PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3598
Candidate Protein Records
3363
Pathway-Level Records
8560
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Scer05G0064260.1 Flavonoid F3H low borderline
Scer05G0064300.1 Flavonoid F3H low borderline
Scer05G0064710.1 Flavonoid F3H low borderline
Scer05G0064970.1 Flavonoid F3H medium borderline
Scer05G0065320.1 Flavonoid F3H medium pass
Scer05G0065670.1 Flavonoid F3H low borderline
Scer06G0002470.1 Flavonoid F3H medium borderline
Scer06G0015520.1 Flavonoid F3H medium borderline
Scer06G0017620.1 Flavonoid F3H medium borderline
Scer06G0021550.1 Flavonoid F3H low borderline
Scer06G0023860.1 Flavonoid F3H medium borderline
Scer06G0027330.1 Flavonoid F3H medium borderline
Scer06G0027350.1 Flavonoid F3H medium borderline
Scer06G0027360.1 Flavonoid F3H medium borderline
Scer06G0027840.1 Flavonoid F3H medium borderline
Scer06G0027850.1 Flavonoid F3H medium borderline
Scer06G0027990.1 Flavonoid F3H medium borderline
Scer06G0028000.1 Flavonoid F3H medium borderline
Scer06G0029880.1 Flavonoid F3H low borderline
Scer06G0029970.1 Flavonoid F3H medium borderline
Scer06G0034600.1 Flavonoid F3H medium borderline
Scer06G0034790.1 Flavonoid F3H medium borderline
Scer06G0034800.1 Flavonoid F3H medium borderline
Scer06G0034810.1 Flavonoid F3H medium borderline
Scer06G0034830.1 Flavonoid F3H medium borderline
Scer06G0034840.1 Flavonoid F3H medium borderline
Scer06G0034850.1 Flavonoid F3H medium borderline
Scer06G0034860.1 Flavonoid F3H medium borderline
Scer06G0034870.1 Flavonoid F3H medium borderline
Scer06G0037690.1 Flavonoid F3H medium borderline
Scer06G0038080.1 Flavonoid F3H medium borderline
Scer06G0038100.1 Flavonoid F3H medium borderline
Scer06G0039590.1 Flavonoid F3H medium borderline
Scer06G0039700.1 Flavonoid F3H medium borderline
Scer06G0043130.1 Flavonoid F3H medium borderline
Scer06G0047380.1 Flavonoid F3H medium borderline
Scer06G0049550.1 Flavonoid F3H low borderline
Scer06G0049570.1 Flavonoid F3H medium borderline
Scer06G0049920.1 Flavonoid F3H medium borderline
Scer06G0049930.1 Flavonoid F3H medium borderline
Scer06G0050670.1 Flavonoid F3H medium borderline
Scer06G0050690.1 Flavonoid F3H medium borderline
Scer07G0001120.1 Flavonoid F3H medium borderline
Scer07G0001210.1 Flavonoid F3H medium borderline
Scer07G0002720.1 Flavonoid F3H medium borderline
Scer07G0002730.1 Flavonoid F3H medium borderline
Scer07G0012960.1 Flavonoid F3H medium borderline
Scer07G0021750.1 Flavonoid F3H medium borderline
Scer07G0026710.1 Flavonoid F3H medium borderline
Scer07G0034120.1 Flavonoid F3H medium borderline