PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3598
Candidate Protein Records
3363
Pathway-Level Records
8560
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Scer04G0041120.1 Alkaloid H6H medium pass
Scer04G0044360.1 Alkaloid H6H low borderline
Scer04G0048220.1 Alkaloid H6H medium pass
Scer04G0048230.1 Alkaloid H6H medium pass
Scer04G0048240.1 Alkaloid H6H low borderline
Scer04G0055530.1 Alkaloid H6H medium borderline
Scer04G0056940.1 Alkaloid H6H medium borderline
Scer04G0057000.1 Alkaloid H6H medium borderline
Scer04G0057020.1 Alkaloid H6H medium borderline
Scer04G0057030.1 Alkaloid H6H medium borderline
Scer05G0024080.1 Alkaloid H6H medium borderline
Scer05G0024140.1 Alkaloid H6H medium borderline
Scer05G0024150.1 Alkaloid H6H medium borderline
Scer05G0024750.1 Alkaloid H6H medium borderline
Scer05G0030020.1 Alkaloid H6H low borderline
Scer05G0030160.1 Alkaloid H6H medium pass
Scer05G0037150.1 Alkaloid H6H medium pass
Scer05G0037160.1 Alkaloid H6H medium pass
Scer05G0040500.1 Alkaloid H6H medium pass
Scer05G0057490.1 Alkaloid H6H low borderline
Scer05G0062740.1 Alkaloid H6H medium borderline
Scer05G0064260.1 Alkaloid H6H low borderline
Scer05G0064300.1 Alkaloid H6H low borderline
Scer05G0065320.1 Alkaloid H6H medium pass
Scer06G0021550.1 Alkaloid H6H low borderline
Scer06G0023860.1 Alkaloid H6H high pass
Scer06G0027350.1 Alkaloid H6H medium borderline
Scer06G0038100.1 Alkaloid H6H medium borderline
Scer07G0014780.1 Alkaloid H6H low borderline
Scer07G0034120.1 Alkaloid H6H medium borderline
Scer07G0043860.1 Alkaloid H6H low borderline
Scer07G0044210.1 Alkaloid H6H medium pass
Scer07G0051040.1 Alkaloid H6H medium borderline
Scer07G0051050.1 Alkaloid H6H medium borderline
Scer07G0051060.1 Alkaloid H6H medium borderline
Scer07G0052090.1 Alkaloid H6H low borderline
Scer07G0052130.1 Alkaloid H6H medium pass
ScerGWHASIY000000080000050.1 Alkaloid H6H medium borderline
ScerGWHASIY000000080002650.1 Alkaloid H6H medium borderline
ScerGWHASIY000000080003720.1 Alkaloid H6H medium borderline
ScerGWHASIY000000080008330.1 Alkaloid H6H low borderline
ScerGWHASIY000000080009600.1 Alkaloid H6H low borderline
ScerGWHASIY000000080010820.1 Alkaloid H6H low borderline
ScerGWHASIY000000080014420.1 Alkaloid H6H low borderline
Scer01G0009720.1 Alkaloid IO medium borderline
Scer01G0036270.1 Alkaloid IO medium borderline
Scer01G0043540.1 Alkaloid IO medium borderline
Scer02G0011240.1 Alkaloid IO medium pass
Scer02G0015400.1 Alkaloid IO medium pass
Scer02G0031270.1 Alkaloid IO medium borderline