PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3598
Candidate Protein Records
3363
Pathway-Level Records
8560
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Scer04G0007010.1 Terpenoid HDR/IspH high pass
Scer05G0055570.1 Terpenoid HDR/IspH low borderline
Scer06G0014030.1 Terpenoid HDS/IspG high pass
Scer06G0014040.1 Terpenoid HDS/IspG medium pass
Scer04G0024260.1 Terpenoid HMGR medium pass
Scer05G0028740.1 Terpenoid HMGR medium pass
Scer06G0022570.1 Terpenoid HMGR medium pass
Scer05G0012050.1 Terpenoid HMGS low borderline
Scer05G0060790.1 Terpenoid HMGS high pass
Scer05G0061750.1 Terpenoid HMGS high pass
Scer07G0024750.1 Terpenoid HMGS high pass
ScerGWHASIY000000080014840.1 Terpenoid HMGS medium pass
Scer01G0033990.1 Terpenoid IDI medium pass
Scer02G0021840.1 Terpenoid IDI medium pass
Scer02G0021870.1 Terpenoid IDI medium pass
Scer02G0047810.1 Terpenoid IDI low borderline
Scer02G0048040.1 Terpenoid MCT/IspD low borderline
Scer03G0047440.1 Terpenoid MCT/IspD high pass
Scer06G0020180.1 Terpenoid MDS/IspF high pass
Scer02G0024750.1 Terpenoid MVD low borderline
Scer05G0047960.1 Terpenoid MVD medium pass
Scer05G0048120.1 Terpenoid MVD medium pass
Scer07G0027090.1 Terpenoid MVD low borderline
Scer02G0014800.1 Terpenoid MVK low borderline
Scer02G0025380.1 Terpenoid MVK low borderline
Scer02G0054190.1 Terpenoid MVK low borderline
Scer02G0062860.1 Terpenoid MVK medium pass
Scer03G0052030.1 Terpenoid MVK low borderline
Scer04G0038700.1 Terpenoid MVK low borderline
Scer06G0001080.1 Terpenoid MVK low borderline
Scer06G0001100.1 Terpenoid MVK low borderline
Scer07G0006920.1 Terpenoid MVK low borderline
Scer07G0012320.1 Terpenoid MVK low borderline
ScerGWHASIY000000080006590.1 Terpenoid MVK low borderline
Scer01G0036510.1 Terpenoid PMK low borderline
Scer03G0047020.1 Terpenoid PMK low borderline
Scer04G0048620.1 Terpenoid PMK low borderline
Scer05G0037480.1 Terpenoid PMK low borderline
Scer07G0002070.1 Terpenoid PMK low borderline
Scer07G0018110.1 Terpenoid PMK medium pass
Scer01G0004740.1 Terpenoid TPS medium pass
Scer01G0004750.1 Terpenoid TPS medium pass
Scer01G0015540.1 Terpenoid TPS medium pass
Scer02G0012170.1 Terpenoid TPS medium pass
Scer02G0012410.1 Terpenoid TPS medium pass
Scer02G0012420.1 Terpenoid TPS medium pass
Scer02G0012450.1 Terpenoid TPS medium pass
Scer02G0012540.1 Terpenoid TPS medium pass
Scer02G0012570.1 Terpenoid TPS medium pass
Scer02G0012600.1 Terpenoid TPS medium pass