PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3598
Candidate Protein Records
3363
Pathway-Level Records
8560
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Scer06G0046000.1 Alkaloid T16H medium borderline
Scer06G0048570.1 Alkaloid T16H medium borderline
Scer06G0055020.1 Alkaloid T16H medium borderline
Scer06G0055050.1 Alkaloid T16H medium borderline
Scer06G0055800.1 Alkaloid T16H medium borderline
Scer06G0056310.1 Alkaloid T16H medium borderline
Scer06G0057920.1 Alkaloid T16H medium borderline
Scer06G0057980.1 Alkaloid T16H medium borderline
Scer07G0003100.1 Alkaloid T16H medium borderline
Scer07G0003580.1 Alkaloid T16H medium borderline
Scer07G0007590.1 Alkaloid T16H medium borderline
Scer07G0017880.1 Alkaloid T16H medium borderline
Scer07G0019700.1 Alkaloid T16H medium borderline
Scer07G0021200.1 Alkaloid T16H medium borderline
Scer07G0024030.1 Alkaloid T16H medium borderline
Scer07G0028600.1 Alkaloid T16H medium borderline
Scer07G0038170.1 Alkaloid T16H medium borderline
Scer07G0044950.1 Alkaloid T16H medium borderline
Scer07G0054780.1 Alkaloid T16H medium borderline
ScerGWHASIY000000080003600.1 Alkaloid T16H medium borderline
ScerGWHASIY000000080004100.1 Alkaloid T16H low borderline
ScerGWHASIY000000080005340.1 Alkaloid T16H medium borderline
ScerGWHASIY000000080009090.1 Alkaloid T16H medium borderline
ScerGWHASIY000000080010210.1 Alkaloid T16H medium borderline
ScerGWHASIY000000080014290.1 Alkaloid T16H medium borderline
ScerGWHASIY000000080016880.1 Alkaloid T16H medium borderline
Scer01G0000020.1 Alkaloid T3O medium borderline
Scer01G0000890.1 Alkaloid T3O medium borderline
Scer01G0000910.1 Alkaloid T3O medium borderline
Scer01G0000930.1 Alkaloid T3O medium borderline
Scer01G0000990.1 Alkaloid T3O medium borderline
Scer01G0001270.1 Alkaloid T3O medium borderline
Scer01G0001600.1 Alkaloid T3O medium borderline
Scer01G0007750.1 Alkaloid T3O medium borderline
Scer01G0010980.1 Alkaloid T3O medium borderline
Scer01G0013870.1 Alkaloid T3O medium borderline
Scer01G0015360.1 Alkaloid T3O medium pass
Scer01G0015600.1 Alkaloid T3O medium pass
Scer01G0017050.1 Alkaloid T3O medium borderline
Scer01G0017490.1 Alkaloid T3O medium borderline
Scer01G0019010.1 Alkaloid T3O low borderline
Scer01G0021410.1 Alkaloid T3O medium borderline
Scer01G0021770.1 Alkaloid T3O medium borderline
Scer01G0022080.1 Alkaloid T3O medium borderline
Scer01G0022130.1 Alkaloid T3O medium borderline
Scer01G0023170.1 Alkaloid T3O medium pass
Scer01G0024470.1 Alkaloid T3O medium pass
Scer01G0024520.1 Alkaloid T3O medium pass
Scer01G0027420.1 Alkaloid T3O medium pass
Scer01G0027470.1 Alkaloid T3O medium pass