PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3363
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Scer05G0017810.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0018170.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0021280.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0021350.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0021660.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0021670.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0021680.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0023720.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0028860.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0033970.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0038470.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0038810.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0039470.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0049210.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0052470.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0052480.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0052490.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0052520.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0052530.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0052540.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0054010.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0056550.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0056680.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0059600.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0062030.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0062050.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0062780.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0062990.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0064200.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0064210.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0064240.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0064650.1 Steroid BR6OX2/CYP85A2 low borderline
Scer05G0064790.1 Steroid BR6OX2/CYP85A2 low borderline
Scer06G0004350.1 Steroid BR6OX2/CYP85A2 low borderline
Scer06G0006850.1 Steroid BR6OX2/CYP85A2 low borderline
Scer06G0010020.1 Steroid BR6OX2/CYP85A2 low borderline
Scer06G0010180.1 Steroid BR6OX2/CYP85A2 low borderline
Scer06G0010410.1 Steroid BR6OX2/CYP85A2 low borderline
Scer06G0011360.1 Steroid BR6OX2/CYP85A2 low borderline
Scer06G0011370.1 Steroid BR6OX2/CYP85A2 low borderline
Scer06G0013620.1 Steroid BR6OX2/CYP85A2 low borderline
Scer06G0017540.1 Steroid BR6OX2/CYP85A2 low borderline
Scer06G0020000.1 Steroid BR6OX2/CYP85A2 low borderline
Scer06G0036690.1 Steroid BR6OX2/CYP85A2 low borderline
Scer06G0043660.1 Steroid BR6OX2/CYP85A2 low borderline
Scer06G0045660.1 Steroid BR6OX2/CYP85A2 low borderline
Scer06G0050080.1 Steroid BR6OX2/CYP85A2 low borderline
Scer06G0055020.1 Steroid BR6OX2/CYP85A2 low borderline
Scer06G0055050.1 Steroid BR6OX2/CYP85A2 low borderline
Scer06G0055800.1 Steroid BR6OX2/CYP85A2 low borderline