PlantSME Plant secondary metabolism enzyme database

Secale cereale (secale_cereale)

Imported from atlas release summary for Secale cereale.

3598
Candidate Protein Records
3363
Pathway-Level Records
8560
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 887 19 UGT (380) View species results
Phenylpropanoid pathway 764 12 POD (385) View species results
Alkaloid pathway 705 20 7DLGT (158) View species results
Flavonoid pathway 533 14 UFGT (361) View species results
Rosmarinic acid pathway 334 7 C4H (185) View species results
Steroid pathway 140 13 SMT1/SMT2/SMT3 (60) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3774 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Scer04G0002520.1 Alkaloid TRI/TRII low borderline
Scer04G0010270.1 Alkaloid TRI/TRII low borderline
Scer04G0016670.1 Alkaloid TRI/TRII medium pass
Scer04G0029500.1 Alkaloid TRI/TRII medium pass
Scer04G0035170.1 Alkaloid TRI/TRII medium pass
Scer04G0035340.1 Alkaloid TRI/TRII medium pass
Scer04G0043360.1 Alkaloid TRI/TRII medium pass
Scer04G0052820.1 Alkaloid TRI/TRII medium pass
Scer05G0001010.1 Alkaloid TRI/TRII medium pass
Scer05G0016650.1 Alkaloid TRI/TRII medium pass
Scer05G0025890.1 Alkaloid TRI/TRII medium borderline
Scer05G0025900.1 Alkaloid TRI/TRII medium borderline
Scer05G0037990.1 Alkaloid TRI/TRII medium pass
Scer05G0041740.1 Alkaloid TRI/TRII low borderline
Scer05G0041910.1 Alkaloid TRI/TRII low borderline
Scer05G0053600.1 Alkaloid TRI/TRII medium pass
Scer05G0053660.1 Alkaloid TRI/TRII medium pass
Scer05G0053690.1 Alkaloid TRI/TRII medium pass
Scer06G0027600.1 Alkaloid TRI/TRII medium pass
Scer06G0033110.1 Alkaloid TRI/TRII low borderline
Scer06G0042210.1 Alkaloid TRI/TRII medium pass
Scer07G0000400.1 Alkaloid TRI/TRII medium pass
Scer07G0000430.1 Alkaloid TRI/TRII medium pass
Scer07G0000500.1 Alkaloid TRI/TRII medium pass
Scer07G0010480.1 Alkaloid TRI/TRII medium pass
Scer07G0010530.1 Alkaloid TRI/TRII medium pass
Scer07G0019320.1 Alkaloid TRI/TRII medium pass
Scer07G0019340.1 Alkaloid TRI/TRII low borderline
Scer07G0022250.1 Alkaloid TRI/TRII medium pass
Scer07G0040790.1 Alkaloid TRI/TRII medium pass
ScerGWHASIY000000080002900.1 Alkaloid TRI/TRII medium pass
ScerGWHASIY000000080003530.1 Alkaloid TRI/TRII medium pass
ScerGWHASIY000000080005360.1 Alkaloid TRI/TRII medium pass
ScerGWHASIY000000080008040.1 Alkaloid TRI/TRII medium pass
ScerGWHASIY000000080015520.1 Alkaloid TRI/TRII medium pass
ScerGWHASIY000000080017620.1 Alkaloid TRI/TRII medium pass
Scer01G0042830.1 Alkaloid TYDC_DDC medium borderline
Scer02G0000850.1 Alkaloid TYDC_DDC medium borderline
Scer02G0028970.1 Alkaloid TYDC_DDC medium borderline
Scer02G0065760.1 Alkaloid TYDC_DDC medium borderline
Scer03G0038130.1 Alkaloid TYDC_DDC medium borderline
Scer03G0046400.1 Alkaloid TYDC_DDC medium borderline
Scer03G0047720.1 Alkaloid TYDC_DDC medium borderline
Scer04G0049220.1 Alkaloid TYDC_DDC medium borderline
Scer04G0049300.1 Alkaloid TYDC_DDC low borderline
Scer04G0059350.1 Alkaloid TYDC_DDC medium borderline
Scer04G0060160.1 Alkaloid TYDC_DDC medium borderline
Scer04G0060170.1 Alkaloid TYDC_DDC medium borderline
Scer05G0063560.1 Alkaloid TYDC_DDC medium borderline
Scer05G0064640.1 Alkaloid TYDC_DDC medium borderline