PlantSME Plant secondary metabolism enzyme database

Solanum pimpinellifolium (solanum_pimpinellifolium)

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Imported from atlas release summary for Solanum pimpinellifolium.

1183
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 336 19 BAHD (132) View species results
Phenylpropanoid pathway 285 12 POD (112) View species results
Alkaloid pathway 259 23 NMT (38) View species results
Flavonoid pathway 135 12 UFGT (50) View species results
Rosmarinic acid pathway 102 7 4CL (32) View species results
Steroid pathway 66 12 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1280 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 249 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BBE
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Gene Pathway Family Confidence Status Best Target
solanum_pimpinellifolium_SPIMP02g0053790 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
solanum_pimpinellifolium_SPIMP02g0053800 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
solanum_pimpinellifolium_SPIMP02g0063920 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
solanum_pimpinellifolium_SPIMP02g0064390 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
solanum_pimpinellifolium_SPIMP02g0064410 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
solanum_pimpinellifolium_SPIMP02g0064420 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
solanum_pimpinellifolium_SPIMP02g0064440 Alkaloid BBE low borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
solanum_pimpinellifolium_SPIMP02g0064470 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
solanum_pimpinellifolium_SPIMP02g0069520 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
solanum_pimpinellifolium_SPIMP02g0069530 Alkaloid BBE low borderline BBE__00004__sp_O64743_BBE15_ARATH
solanum_pimpinellifolium_SPIMP02g0069540 Alkaloid BBE low borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
solanum_pimpinellifolium_SPIMP02g0069630 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
solanum_pimpinellifolium_SPIMP02g0070890 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
solanum_pimpinellifolium_SPIMP03g0086240 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
solanum_pimpinellifolium_SPIMP04g0148050 Alkaloid BBE medium borderline BBE__00003__sp_F1T161_BBLC1_TOBAC
solanum_pimpinellifolium_SPIMP06g0193050 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
solanum_pimpinellifolium_SPIMP06g0193060 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
solanum_pimpinellifolium_SPIMP09g0278560 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
solanum_pimpinellifolium_SPIMP10g0303350 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
solanum_pimpinellifolium_SPIMP10g0303360 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
solanum_pimpinellifolium_SPIMP10g0303370 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
solanum_pimpinellifolium_SPIMP10g0303380 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
solanum_pimpinellifolium_SPIMP10g0303390 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
solanum_pimpinellifolium_SPIMP11g0327870 Alkaloid BBE low borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH