PlantSME Plant secondary metabolism enzyme database

Solanum pimpinellifolium (solanum_pimpinellifolium)

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Imported from atlas release summary for Solanum pimpinellifolium.

1183
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 336 19 BAHD (132) View species results
Phenylpropanoid pathway 285 12 POD (112) View species results
Alkaloid pathway 259 23 NMT (38) View species results
Flavonoid pathway 135 12 UFGT (50) View species results
Rosmarinic acid pathway 102 7 4CL (32) View species results
Steroid pathway 66 12 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1280 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 249 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
solanum_pimpinellifolium_SPIMP01g0006370 Alkaloid GS medium pass
solanum_pimpinellifolium_SPIMP01g0045800 Alkaloid GS high pass
solanum_pimpinellifolium_SPIMP02g0054490 Alkaloid GS high pass
solanum_pimpinellifolium_SPIMP02g0063480 Alkaloid GS high pass
solanum_pimpinellifolium_SPIMP02g0068930 Alkaloid GS low borderline
solanum_pimpinellifolium_SPIMP03g0099230 Alkaloid GS high pass
solanum_pimpinellifolium_SPIMP03g0099240 Alkaloid GS high pass
solanum_pimpinellifolium_SPIMP03g0103150 Alkaloid GS low borderline
solanum_pimpinellifolium_SPIMP03g0103160 Alkaloid GS low borderline
solanum_pimpinellifolium_SPIMP04g0132900 Alkaloid GS medium pass
solanum_pimpinellifolium_SPIMP04g0146800 Alkaloid GS low borderline
solanum_pimpinellifolium_SPIMP05g0151150 Alkaloid GS low borderline
solanum_pimpinellifolium_SPIMP05g0164610 Alkaloid GS medium pass
solanum_pimpinellifolium_SPIMP05g0177180 Alkaloid GS medium pass
solanum_pimpinellifolium_SPIMP06g0184280 Alkaloid GS low borderline
solanum_pimpinellifolium_SPIMP08g0238080 Alkaloid GS high pass
solanum_pimpinellifolium_SPIMP09g0271980 Alkaloid GS low borderline
solanum_pimpinellifolium_SPIMP09g0273160 Alkaloid GS low borderline
solanum_pimpinellifolium_SPIMP09g0273180 Alkaloid GS low borderline
solanum_pimpinellifolium_SPIMP11g0318810 Alkaloid GS high pass
solanum_pimpinellifolium_SPIMP11g0318820 Alkaloid GS high pass
solanum_pimpinellifolium_SPIMP11g0318840 Alkaloid GS high pass
solanum_pimpinellifolium_SPIMP11g0319220 Alkaloid GS high pass
solanum_pimpinellifolium_SPIMP11g0319230 Alkaloid GS high pass
solanum_pimpinellifolium_SPIMP11g0337590 Alkaloid GS low borderline
solanum_pimpinellifolium_SPIMP12g0344530 Alkaloid GS low borderline
solanum_pimpinellifolium_SPIMP12g0358060 Alkaloid GS high pass