PlantSME Plant secondary metabolism enzyme database

Solanum pimpinellifolium (solanum_pimpinellifolium)

/

Imported from atlas release summary for Solanum pimpinellifolium.

1183
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 336 19 BAHD (132) View species results
Phenylpropanoid pathway 285 12 POD (112) View species results
Alkaloid pathway 259 23 NMT (38) View species results
Flavonoid pathway 135 12 UFGT (50) View species results
Rosmarinic acid pathway 102 7 4CL (32) View species results
Steroid pathway 66 12 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1280 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 249 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
Reset
Gene Pathway Family Confidence Status
solanum_pimpinellifolium_SPIMP01g0031520 Alkaloid PYKS high pass
solanum_pimpinellifolium_SPIMP01g0049000 Alkaloid PYKS high pass
solanum_pimpinellifolium_SPIMP02g0059330 Alkaloid PYKS low borderline
solanum_pimpinellifolium_SPIMP02g0075540 Alkaloid PYKS low borderline
solanum_pimpinellifolium_SPIMP03g0084930 Alkaloid PYKS low borderline
solanum_pimpinellifolium_SPIMP03g0105260 Alkaloid PYKS low borderline
solanum_pimpinellifolium_SPIMP04g0148110 Alkaloid PYKS low borderline
solanum_pimpinellifolium_SPIMP05g0154850 Alkaloid PYKS low borderline
solanum_pimpinellifolium_SPIMP05g0154870 Alkaloid PYKS low borderline
solanum_pimpinellifolium_SPIMP05g0158220 Alkaloid PYKS low borderline
solanum_pimpinellifolium_SPIMP05g0173840 Alkaloid PYKS high pass
solanum_pimpinellifolium_SPIMP05g0174280 Alkaloid PYKS high pass
solanum_pimpinellifolium_SPIMP06g0183110 Alkaloid PYKS high pass
solanum_pimpinellifolium_SPIMP06g0188920 Alkaloid PYKS low borderline
solanum_pimpinellifolium_SPIMP06g0188940 Alkaloid PYKS low borderline
solanum_pimpinellifolium_SPIMP06g0188950 Alkaloid PYKS low borderline
solanum_pimpinellifolium_SPIMP06g0193470 Alkaloid PYKS low borderline
solanum_pimpinellifolium_SPIMP08g0234930 Alkaloid PYKS low borderline
solanum_pimpinellifolium_SPIMP08g0248000 Alkaloid PYKS low borderline
solanum_pimpinellifolium_SPIMP08g0248160 Alkaloid PYKS low borderline
solanum_pimpinellifolium_SPIMP09g0277540 Alkaloid PYKS low borderline
solanum_pimpinellifolium_SPIMP09g0277550 Alkaloid PYKS low borderline
solanum_pimpinellifolium_SPIMP09g0282040 Alkaloid PYKS low borderline
solanum_pimpinellifolium_SPIMP09g0284540 Alkaloid PYKS high pass
solanum_pimpinellifolium_SPIMP10g0291040 Alkaloid PYKS low borderline
solanum_pimpinellifolium_SPIMP11g0337910 Alkaloid PYKS low borderline
solanum_pimpinellifolium_SPIMP12g0340150 Alkaloid PYKS low borderline
solanum_pimpinellifolium_SPIMP12g0359150 Alkaloid PYKS low borderline
solanum_pimpinellifolium_SPIMP12g0362790 Alkaloid PYKS medium pass