PlantSME Plant secondary metabolism enzyme database

Solanum pimpinellifolium (solanum_pimpinellifolium)

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Imported from atlas release summary for Solanum pimpinellifolium.

1183
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 336 19 BAHD (132) View species results
Phenylpropanoid pathway 285 12 POD (112) View species results
Alkaloid pathway 259 23 NMT (38) View species results
Flavonoid pathway 135 12 UFGT (50) View species results
Rosmarinic acid pathway 102 7 4CL (32) View species results
Steroid pathway 66 12 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1280 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 249 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HCT
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Gene Pathway Family Confidence Status Best Target
solanum_pimpinellifolium_SPIMP01g0007810 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
solanum_pimpinellifolium_SPIMP01g0024370 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
solanum_pimpinellifolium_SPIMP03g0105290 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
solanum_pimpinellifolium_SPIMP03g0114000 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
solanum_pimpinellifolium_SPIMP04g0123320 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
solanum_pimpinellifolium_SPIMP04g0148390 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
solanum_pimpinellifolium_SPIMP05g0159340 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
solanum_pimpinellifolium_SPIMP05g0160780 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
solanum_pimpinellifolium_SPIMP05g0166680 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
solanum_pimpinellifolium_SPIMP06g0187120 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
solanum_pimpinellifolium_SPIMP06g0201520 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
solanum_pimpinellifolium_SPIMP07g0206850 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
solanum_pimpinellifolium_SPIMP07g0211650 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
solanum_pimpinellifolium_SPIMP07g0223660 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
solanum_pimpinellifolium_SPIMP07g0223690 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
solanum_pimpinellifolium_SPIMP07g0223700 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
solanum_pimpinellifolium_SPIMP08g0234240 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
solanum_pimpinellifolium_SPIMP08g0234310 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
solanum_pimpinellifolium_SPIMP08g0250680 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
solanum_pimpinellifolium_SPIMP09g0265480 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
solanum_pimpinellifolium_SPIMP11g0317370 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
solanum_pimpinellifolium_SPIMP11g0323970 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
solanum_pimpinellifolium_SPIMP11g0333190 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
solanum_pimpinellifolium_SPIMP11g0333850 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
solanum_pimpinellifolium_SPIMP11g0333870 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
solanum_pimpinellifolium_SPIMP11g0333920 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
solanum_pimpinellifolium_SPIMP12g0338710 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC